RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CFAP36Q96G28 342 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 MARK4Q96L34 752 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 CENPKQ9BS16 269 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 OPN3Q9H1Y3 402 aaPredicted RBP12.12□□□□□ -0.47
NDC1-202ENST00000480952 ACTR8Q9H981 624 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 YAE1D1Q9NRH1 226 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 TAS2R10Q9NYW0 307 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
NDC1-202ENST00000480952 A0A087X1B8 175 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 FAM95CA0A1B0GW59 222 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 TLX2O43763 284 aaPredicted RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 CCNT2O60583 730 aaKnown RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 TMCC2O75069 709 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 ICOSLGO75144 302 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 SOX30O94993 753 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 RHOXF2BP0C7M4 288 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 ABCD3P28288 659 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 LOXP28300 417 aaPredicted RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 SERPINB1P30740 379 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 LHX2P50458 406 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 TAS2R39P59534 338 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 FUT7Q11130 342 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 HP1BP3Q5SSJ5 553 aaPredicted RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 RNASEH2BQ5TBB1 312 aaKnown RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 ANKRD34AQ69YU3 496 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 VWA1Q6PCB0 445 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 NUP54Q7Z3B4 507 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 BTLAQ7Z6A9 289 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 GPSM1Q86YR5 675 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 SPATA6LQ8N4H0 392 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 OSBPL11Q9BXB4 747 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 OR2B2Q9GZK3 357 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 OR10A5Q9H207 317 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 WDR41Q9HAD4 459 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 CXorf21Q9HAI6 301 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 GALNT9Q9HCQ5 603 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 KLRF1Q9NZS2 232 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 PTBP2Q9UKA9 531 aaKnown RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 EXO1Q9UQ84 846 aaKnown RBP12.11□□□□□ -0.47
NDC1-202ENST00000480952 DLGAP4Q9Y2H0 992 aa12.11□□□□□ -0.47
NDC1-202ENST00000480952 DSCAMO60469 2012 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 A0A1W2PR48 441 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 PHF1O43189 567 aaPredicted RBP12.1□□□□□ -0.47
NDC1-202ENST00000480952 PPM1BO75688 479 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 NR2F6P10588 404 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 NAGAP17050 411 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 CCKARP32238 428 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 GFRA1P56159 465 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 SNTA1Q13424 505 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 DDX39BQ13838 428 aaKnown RBP12.1□□□□□ -0.47
NDC1-202ENST00000480952 CHRFAM7AQ494W8 412 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 ZNF704Q6ZNC4 412 aaPredicted RBP12.1□□□□□ -0.47
NDC1-202ENST00000480952 SH2D5Q6ZV89 423 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 ZC3HC1Q86WB0 502 aaKnown RBP12.1□□□□□ -0.47
NDC1-202ENST00000480952 GALNT12Q8IXK2 581 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 LAS2Q8IYD9 372 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 ZNF615Q8N8J6 731 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 WDSUB1Q8N9V3 476 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 C17orf47Q8NEP4 570 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 OR7G3Q8NG95 312 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 ZNF845Q96IR2 970 aaPredicted RBP12.1□□□□□ -0.47
NDC1-202ENST00000480952 SFXN2Q96NB2 322 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 NODALQ96S42 347 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 KLHL4Q9C0H6 718 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 DERL2Q9GZP9 239 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 LZTFL1Q9NQ48 299 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 CD274Q9NZQ7 290 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 RNF112Q9ULX5 631 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 CUBNO60494 3623 aa12.1□□□□□ -0.47
NDC1-202ENST00000480952 LRRC14BA6NHZ5 514 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 HAX1O00165 279 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 PLPP1O14494 284 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 CD5LO43866 347 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 S100BP04271 92 aaPredicted RBP12.09□□□□□ -0.47
NDC1-202ENST00000480952 EPB42P16452 691 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 ZNF708P17019 499 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 EPORP19235 508 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 PIK3R1P27986 724 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 ELK3P41970 407 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 KIR2DL2P43627 348 aaPredicted RBP12.09□□□□□ -0.47
NDC1-202ENST00000480952 SLC12A2P55011 1212 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 CLDN18P56856 261 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 SIRPAP78324 504 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 PPP1R7Q15435 360 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 NNATQ16517 81 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 C6orf163Q5TEZ5 329 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 DESI1Q6ICB0 168 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 TMEM81Q6P7N7 255 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 CYP20A1Q6UW02 462 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 C22orf34Q6ZV56 151 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
NDC1-202ENST00000480952 ZNF610Q8N9Z0 462 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms