RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 CREB3L4Q8TEY5 395 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 KCNE4Q8WWG9 221 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FGF11Q92914 225 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 STMN2Q93045 179 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MR1Q95460 341 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RGMAQ96B86 450 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MTFMTQ96DP5 389 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 TM4SF19Q96DZ7 209 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MMABQ96EY8 250 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 QRFPRQ96P65 431 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 LRRC37BQ96QE4 947 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MTERF1Q99551 399 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MRPS26Q9BYN8 205 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RBM38Q9H0Z9 239 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SPNS1Q9H2V7 528 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 TPK1Q9H3S4 243 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 POFUT1Q9H488 388 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 Q9H521 79 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MANSC1Q9H8J5 431 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 C12orf10Q9HB07 376 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 MOV10Q9HCE1 1003 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF304Q9HCX3 659 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ASCL3Q9NQ33 180 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 DMRT3Q9NQL9 472 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 THAP1Q9NVV9 213 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FOXJ2Q9P0K8 574 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 IFT80Q9P2H3 777 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 DKK4Q9UBT3 224 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 NKX1-2Q9UD57 310 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZMAT5Q9UDW3 170 aaKnown RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 KCND3Q9UK17 655 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PADI1Q9ULC6 663 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF490Q9ULM2 529 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PLA2G2DQ9UNK4 145 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 WASF3Q9UPY6 502 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PRELID1Q9Y255 219 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 PADI2Q9Y2J8 665 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 FIS1Q9Y3D6 152 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 RAP2CQ9Y3L5 183 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 SLC22A7Q9Y694 548 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 DMXL1Q9Y485 3027 aa5.83□□□□□ -1.48
SF3B1-209ENST00000479532 A0A1W2PNU3 283 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MED19A0JLT2 244 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PMS2P1A4D2B8 440 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 LRIT2A6NDA9 550 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SYNDIG1LA6NDD5 238 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C21orf140B9A014 251 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SLCO1B7G3V0H7 640 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 H3BMH7 237 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MANBAO00462 879 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 KLF11O14901 512 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 P2RX6O15547 441 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ERI3O43414 337 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 B3GALT2O43825 422 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 NRP2O60462 931 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PRAMEF4O60810 478 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 GUCY1B2O75343 617 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MYO1DO94832 1006 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SEMA3DO95025 777 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PSMG1O95456 288 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PDYNP01213 254 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 STATHP02808 62 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 FGF4P08620 206 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 CLEC2LP0C7M8 214 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 GSTT2P0CG29 244 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 GSTT2BP0CG30 244 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF888P0CJ79 500 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF28P17035 718 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ALOX12P18054 663 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ITGAXP20702 1163 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SSR2P43308 183 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 RPS3AP61247 264 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 RPS13P62277 151 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 OCA2Q04671 838 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 DBPQ10586 325 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MED21Q13503 144 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 AP5B1Q2VPB7 878 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SPATS1Q496A3 300 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SPIN4Q56A73 249 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C6orf163Q5TEZ5 329 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C1orf189Q5VU69 101 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PRAMEF9Q5VWM5 478 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 KHDRBS2Q5VWX1 349 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SLX4IPQ5VYV7 408 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 CD276Q5ZPR3 534 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 CYP20A1Q6UW02 462 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 UNQ6494/PRO21346Q6UXR6 183 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ETV3LQ6ZN32 361 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ESPNLQ6ZVH7 1005 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 NUDT13Q86X67 352 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ZFAND4Q86XD8 727 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 CRLF3Q8IUI8 442 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 DDIASQ8IXT1 998 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MARVELD2Q8N4S9 558 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C7orf57Q8NEG2 295 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 OR2L5Q8NG80 312 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ANGPTL6Q8NI99 470 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 WDR20Q8TBZ3 569 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MDM1Q8TC05 714 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms