RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 H0YIG0 161 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 TMX2-CTNND1H3BSU7 103 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 AGRPO00253 132 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 RFXANKO14593 260 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 PGRMC2O15173 223 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CSO75390 466 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 ERN1O75460 977 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 KCNH1O95259 989 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 C6orf47O95873 294 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 NPPAP01160 153 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CD3EP07766 207 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 FGF5P12034 268 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CCL4P13236 92 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CSRP1P21291 193 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 SDHBP21912 280 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SLC6A2P23975 617 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 NTSP30990 170 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 TSPAN7P41732 249 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 TRPC1P48995 793 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SLC7A2P52569 658 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ARSFP54793 590 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CLDN6P56747 220 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 PSME3P61289 254 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SIM1P81133 766 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 MAT1AQ00266 395 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 PLIN5Q00G26 463 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 MC2RQ01718 297 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 DUSP2Q05923 314 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 DMTNQ08495 405 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 LRRC74AQ0VAA2 488 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 GAB1Q13480 694 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 TRIP6Q15654 476 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 CEBPEQ15744 281 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SYT16Q17RD7 645 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ISXQ2M1V0 245 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 C6orf10Q5SRN2 563 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 RHBDD2Q6NTF9 364 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 PWWP2BQ6NUJ5 590 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 PRMT9Q6P2P2 845 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CYB5D1Q6P9G0 228 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 C6orf15Q6UXA7 325 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 TTLL10Q6ZVT0 673 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 COX15Q7KZN9 410 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 GPR155Q7Z3F1 870 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ARPINQ7Z6K5 226 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 PPP1R3BQ86XI6 285 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 TMEM126BQ8IUX1 230 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ULK2Q8IYT8 1036 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 NATD1Q8N6N6 113 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 OR8J3Q8NGG0 315 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 OR4A15Q8NGL6 344 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 GOT1L1Q8NHS2 421 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 DNAJB14Q8TBM8 379 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 TMEM125Q96AQ2 219 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 MCUR1Q96AQ8 359 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 LRRC58Q96CX6 371 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 MMABQ96EY8 250 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 CNRIP1Q96F85 164 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 ZNF681Q96N22 645 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 GBP5Q96PP8 586 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CGREF1Q99674 301 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CPPED1Q9BRF8 314 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 NDC1Q9BTX1 674 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 STRADBQ9C0K7 418 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 APMAPQ9HDC9 416 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SPAG4Q9NPE6 437 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SLC35C2Q9NQQ7 365 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SLC6A13Q9NSD5 602 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ACSS1Q9NUB1 689 aaPredicted RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 SLC25A37Q9NYZ2 338 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 VAPAQ9P0L0 249 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ABCD2Q9UBJ2 740 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 DHCR7Q9UBM7 475 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 NDOR1Q9UHB4 597 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 CROTQ9UKG9 612 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 UTS2RQ9UKP6 389 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 PRPF19Q9UMS4 504 aaKnown RBP6.24□□□□□ -1.41
USP48-208ENST00000479177 ERVK-11Q9UQG0 969 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 ENTPD4Q9Y227 616 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 LOXL2Q9Y4K0 774 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SPACA6W5XKT8 324 aa6.24□□□□□ -1.41
USP48-208ENST00000479177 SPAARA0A1B0GVQ0 90 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 A0A1W2PRB8 838 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 A0A1W2PS29 197 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 BLACEA4D250 179 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PMS2P1A4D2B8 440 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MYO1GB0I1T2 1018 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FAM227AF5H4B4 570 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 NME4O00746 187 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FGF17O60258 216 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ERAL1O75616 437 aaKnown RBP6.23□□□□□ -1.41
USP48-208ENST00000479177 SCRG1O75711 98 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 PDE5AO76074 875 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 TSPAN15O95858 294 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 MT-CO3P00414 261 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FHP07954 510 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 FTH1P19P0C7X4 201 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 ZCCHC18P0CG32 403 aa6.23□□□□□ -1.41
USP48-208ENST00000479177 CDK4P11802 303 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms