RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PRKYO43930 277 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 SUSD5O60279 629 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 FGF1P05230 155 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 XCR1P46094 333 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 PITPNBP48739 271 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 TAF6P49848 677 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 ZNF140P52738 457 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 SOX4Q06945 474 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 CHRNA6Q15825 494 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 HAGHLQ6PII5 290 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 CD200R1LQ6Q8B3 271 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 TOMM5Q8N4H5 51 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 SAMD12Q8N8I0 201 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 ARRDC4Q8NCT1 418 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 OR5M3Q8NGP4 307 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 SGK3Q96BR1 496 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 RSPH9Q9H1X1 276 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 PRDM9Q9NQV7 894 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 TLR8Q9NR97 1041 aaKnown RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 CA10Q9NS85 328 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 RPH3AQ9Y2J0 694 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 PCDHB11Q9Y5F2 797 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 RALGAPA2Q2PPJ7 1873 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 PTAFRP25105 342 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 ACSL1P33121 698 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 MVDP53602 400 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 DHODHQ02127 395 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 MTAPQ13126 283 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 GAB1Q13480 694 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 RGNQ15493 299 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 SGCAQ16586 387 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 ZNF770Q6IQ21 691 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 SEZ6L2Q6UXD5 910 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 MBOAT1Q6ZNC8 495 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 DBX2Q6ZNG2 339 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 C12orf45Q8N5I9 185 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 C11orf65Q8NCR3 313 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 RPLP0P6Q8NHW5 317 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 SELENOMQ8WWX9 145 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 HHIPQ96QV1 700 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 EQTNQ9NQ60 294 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 NLE1Q9NVX2 485 aaPredicted RBP20.11■□□□□ 0.81
SDF4-206ENST00000478938 PIPOXQ9P0Z9 390 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 RPS6KB2Q9UBS0 482 aa20.11■□□□□ 0.81
SDF4-206ENST00000478938 TRBV4-1A0A0J9YWV2 114 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 OR6C65A6NJZ3 312 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 GABRPO00591 440 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 ANKRD34CP0C6C1 535 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 COX7A2P14406 83 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 PVALBP20472 110 aaPredicted RBP20.1■□□□□ 0.81
SDF4-206ENST00000478938 PRMT2P55345 433 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 RNF175Q8N4F7 328 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 RELL2Q8NC24 303 aaPredicted RBP20.1■□□□□ 0.81
SDF4-206ENST00000478938 OR8J1Q8NGP2 316 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 ASZ1Q8WWH4 475 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 TCEAL3Q969E4 200 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 EXOSC3Q9NQT5 275 aaKnown RBP20.1■□□□□ 0.81
SDF4-206ENST00000478938 MCM3APO60318 1980 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 PHIPQ8WWQ0 1821 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 LRRC72A6NJI9 287 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 GPR31O00270 319 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 RECQL4O94761 1208 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 IFNA4P05014 189 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 OSMP13725 252 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 RAB41Q5JT25 222 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 METTL11BQ5VVY1 283 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 C12orf73Q69YU5 71 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 OR5M10Q6IEU7 315 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 SLC25A25Q6KCM7 469 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 PLPPR4Q7Z2D5 763 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 EDARADDQ8WWZ3 215 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 PIGKQ92643 395 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 TADA1Q96BN2 335 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 UBL7Q96S82 380 aaPredicted RBP20.1■□□□□ 0.81
SDF4-206ENST00000478938 SPATA5L1Q9BVQ7 753 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 SLC6A20Q9NP91 592 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 THSD1Q9NS62 852 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 MGAT4CQ9UBM8 478 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 TRPS1Q9UHF7 1281 aa20.1■□□□□ 0.81
SDF4-206ENST00000478938 OR2W5A6NFC9 320 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 GPR182O15218 404 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 ARPC5O15511 151 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 URODP06132 367 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 LAMP1P11279 417 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 PEPDP12955 493 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 HSD17B2P37059 387 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 RFC3P40938 356 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 CCL23P55773 120 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 HTR4Q13639 388 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 GK2Q14410 553 aaPredicted RBP20.09■□□□□ 0.81
SDF4-206ENST00000478938 RBMS2Q15434 407 aaKnown RBP20.09■□□□□ 0.81
SDF4-206ENST00000478938 MTFR2Q6P444 385 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 BTN2A1Q7KYR7 527 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 ASPGQ86U10 573 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 ARIH2OSQ8N7S6 290 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 SPATA33Q96N06 139 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 MYOZ2Q9NPC6 264 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 NTMQ9P121 344 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 TESQ9UGI8 421 aaKnown RBP20.09■□□□□ 0.81
SDF4-206ENST00000478938 UBQLN1Q9UMX0 589 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms