RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMEM237Q96Q45 408 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF300Q96RE9 604 aaPredicted RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 RUFY1Q96T51 708 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 S1PR3Q99500 378 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SSX3Q99909 188 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 OVOL2Q9BRP0 275 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 UBAC1Q9BSL1 405 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZCCHC3Q9NUD5 404 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 TEKT2Q9UIF3 430 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 PPP1R3CQ9UQK1 317 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ANGPTL3Q9Y5C1 460 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 ETV7Q9Y603 341 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 MICAL3Q7RTP6 2002 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 PTPRSQ13332 1948 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 BAZ2BQ9UIF8 2168 aaKnown RBP3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 SIP14410 1827 aa3.42□□□□□ -1.86
CDC42BPA-212ENST00000478573 RALGAPA2Q2PPJ7 1873 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 TLR4O00206 839 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 RTCAO00442 366 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CCSO14618 274 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 PSMD3O43242 534 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF821O75541 412 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 FGF19O95750 216 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 EPOP01588 193 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SERPINF2P08697 491 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 NUDT17P0C025 328 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CT45A8P0DMV1 189 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CT45A9P0DMV2 189 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SKILP12757 684 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF26P17031 533 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 UGT1A6P19224 532 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 MX1P20591 662 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 AHCYP23526 432 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 GJB2P29033 226 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 FEN1P39748 380 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 TSFMP43897 325 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 LMO4P61968 165 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SNRPD1P62314 119 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 IRX3P78415 501 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CYCSP99999 105 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 GFPT1Q06210 699 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 GIT2Q14161 759 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SPHARQ15513 63 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 HLA-BQ31612 363 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CT45A2Q5DJT8 189 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SNRNP48Q6IEG0 339 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 BHLHB9Q6PI77 547 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 DLEU7Q6UYE1 221 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 Q6ZRP5 223 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 TMEM179Q6ZVK1 233 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 Q6ZVQ6 151 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 RFPL4BQ6ZWI9 263 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 NLRP14Q86W24 1093 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ELMOD1Q8N336 334 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC43A2Q8N370 569 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 HDDC3Q8N4P3 179 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 MRPL43Q8N983 215 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 TRPV3Q8NET8 790 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 C8orf46Q8TAG6 207 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 EXOC6Q8TAG9 804 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 KIAA1524Q8TCG1 905 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SLC13A3Q8WWT9 602 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF689Q96CS4 500 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF560Q96MR9 790 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 NTMT1Q9BV86 223 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 PAPOLGQ9BWT3 736 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CLEC7AQ9BXN2 247 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ABCG8Q9H221 673 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CARD9Q9H257 536 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 MTIF3Q9H2K0 278 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 BOLA2Q9H3K6 86 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 FGF22Q9HCT0 170 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 PIGVQ9NUD9 493 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 PLCXD1Q9NUJ7 323 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ACOXLQ9NUZ1 547 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZNF319Q9P2F9 582 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 FETUBQ9UGM5 382 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 RPH3AQ9Y2J0 694 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 MRPS28Q9Y2Q9 187 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 SH3GLB1Q9Y371 365 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 RNF215Q9Y6U7 377 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ZHX2Q9Y6X8 837 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ARID2Q68CP9 1835 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CENPFP49454 3210 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 RAD50Q92878 1312 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 CEP290O15078 2479 aa3.41□□□□□ -1.86
CDC42BPA-212ENST00000478573 ATG2AQ2TAZ0 1938 aa3.4□□□□□ -1.86
CDC42BPA-212ENST00000478573 MYH15Q9Y2K3 1946 aa3.4□□□□□ -1.86
CDC42BPA-212ENST00000478573 RNF103-CHMP3A0A140T963 221 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 SYCE3A1L190 88 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 NPIPB9F8W1W9 429 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 RNF113AO15541 343 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPAA1O43292 621 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 TLX2O43763 284 aaPredicted RBP3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 LRCH4O75427 683 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 CPNE6O95741 557 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 IGHEP01854 428 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 ALPPP05187 535 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 CHRNGP07510 517 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 GSTA2P09210 222 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms