RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 TTC28Q96AY4 2481 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 HCN1O60741 890 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 TMCC2O75069 709 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 LTBRP36941 435 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 CAPZBP47756 277 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 PCDH1Q08174 1060 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 FZD2Q14332 565 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 TMEM44Q2T9K0 475 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 FAM69BQ5VUD6 431 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 C18orf63Q68DL7 685 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 HSDL2Q6YN16 418 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 NANOGNBQ7Z5D8 188 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 OR5D16Q8NGK9 328 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 IL4I1Q96RQ9 567 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 ATG4BQ9Y4P1 393 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 FBP2O00757 339 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 LYNP07948 512 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 RHCEP18577 417 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 CSNK2BP67870 215 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 DCAF12Q5T6F0 453 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 CES4AQ5XG92 561 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 TMPRSS11AQ6ZMR5 421 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 TM4SF18Q96CE8 201 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 ULBP3Q9BZM4 244 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 FAM192AQ9GZU8 254 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 MAGIXQ9H6Y5 334 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 SMURF2Q9HAU4 748 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 ATXN7L1Q9ULK2 861 aaPredicted RBP11.34□□□□□ -0.59
PCCB-214ENST00000478469 RNF215Q9Y6U7 377 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 GVINP1Q7Z2Y8 2422 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 EME2A4GXA9 379 aaPredicted RBP11.34□□□□□ -0.59
PCCB-214ENST00000478469 EFCAB10A6NFE3 127 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 PAPLNO95428 1278 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 PCGF2P35227 344 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 FUNDC1Q8IVP5 155 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 PELI3Q8N2H9 469 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 ENDOVQ8N8Q3 282 aaKnown RBP11.34□□□□□ -0.59
PCCB-214ENST00000478469 BAHD1Q8TBE0 780 aaPredicted RBP11.34□□□□□ -0.59
PCCB-214ENST00000478469 MS4A6EQ96DS6 147 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 OR4K3Q96R72 315 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 NODALQ96S42 347 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 HOXD1Q9GZZ0 328 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCCB-214ENST00000478469 PRDM6Q9NQX0 595 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCCB-214ENST00000478469 SNX11Q9Y5W9 270 aa11.34□□□□□ -0.59
PCCB-214ENST00000478469 B3GALT4O96024 378 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 GIMD1P0DJR0 217 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ITGA3P26006 1051 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 RNF144AP50876 292 aaPredicted RBP11.33□□□□□ -0.6
PCCB-214ENST00000478469 SMSP52788 366 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 HLA-BQ31612 363 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ENPP6Q6UWR7 440 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ABTB1Q969K4 478 aaPredicted RBP11.33□□□□□ -0.6
PCCB-214ENST00000478469 HHATLQ9HCP6 504 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 PPP4R1LQ9P1A2 415 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 SPTA1P02549 2419 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 PRAMEF33A0A0G2JMD5 474 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 VILLO15195 856 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 TALDO1P37837 337 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 EXOSC7Q15024 291 aaKnown RBP11.33□□□□□ -0.6
PCCB-214ENST00000478469 IQCCQ4KMZ1 466 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 OR52R1Q8NGF1 315 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 MOSPD2Q8NHP6 518 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 DIO2Q92813 273 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 TSSK6Q9BXA6 273 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 TMEM221A6NGB7 291 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 M0R296 226 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 SOX14O95416 240 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ARRB2P32121 409 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 DCDP81605 110 aaKnown RBP11.33□□□□□ -0.6
PCCB-214ENST00000478469 E2F1Q01094 437 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 GPR19Q15760 415 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 OAFQ86UD1 273 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ZNF440Q8IYI8 595 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 TNFRSF12AQ9NP84 129 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ASIC5Q9NY37 505 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ZNF624Q9P2J8 865 aaPredicted RBP11.33□□□□□ -0.6
PCCB-214ENST00000478469 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ENPP4Q9Y6X5 453 aa11.33□□□□□ -0.6
PCCB-214ENST00000478469 ZNF646O15015 1829 aaPredicted RBP11.32□□□□□ -0.6
PCCB-214ENST00000478469 SMIM31A0A1B0GVY4 71 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 SELENOWP63302 87 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 ABI3BPQ7Z7G0 1075 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 FBXL6Q8N531 539 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 OR6K6Q8NGW6 343 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 MED16Q9Y2X0 877 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 LCMT2O60294 686 aaKnown RBP11.32□□□□□ -0.6
PCCB-214ENST00000478469 H6PDO95479 791 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 RENP00797 406 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 FESP07332 822 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 PGCP20142 388 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 ZSWIM7Q19AV6 140 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 FAM71E1Q6IPT2 247 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 COPS4Q9BT78 406 aa11.32□□□□□ -0.6
PCCB-214ENST00000478469 KCMF1Q9P0J7 381 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms