RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TMEM41AQ96HV5 264 aa15.26■□□□□ 0.03
TRIM13-208ENST00000478111 NSUN5Q96P11 429 aaKnown RBP15.26■□□□□ 0.03
TRIM13-208ENST00000478111 FRG2BQ96QU4 278 aa15.26■□□□□ 0.03
TRIM13-208ENST00000478111 EPB41L4BQ9H329 900 aa15.26■□□□□ 0.03
TRIM13-208ENST00000478111 ADAM29Q9UKF5 820 aa15.26■□□□□ 0.03
TRIM13-208ENST00000478111 PCTPQ9UKL6 214 aa15.26■□□□□ 0.03
TRIM13-208ENST00000478111 A0A1B0GTL3 188 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MBD3L4A6NDZ8 208 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MBD3L3A6NE82 208 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MBD3L5A6NJ08 208 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 CD8B2A6NJW9 211 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 IL2RAP01589 272 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 PORP16435 677 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 KLK2P20151 261 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 PTGDSP41222 190 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MAGEA12P43365 314 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 SERPINB8P50452 374 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 NAGLUP54802 743 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 NRG3P56975 720 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 SLC7A5Q01650 507 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 UAP1Q16222 522 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 PRICKLE4Q2TBC4 344 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 WIPI1Q5MNZ9 446 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 FAM219BQ5XKK7 198 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 TIGD3Q6B0B8 471 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 KLC3Q6P597 504 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 TMEM81Q6P7N7 255 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 FAM111BQ6SJ93 734 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 ZNF572Q7Z3I7 529 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MMP21Q8N119 569 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 METTL4Q8N3J2 472 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MBD3L2Q8NHZ7 208 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 HGDQ93099 445 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 ATP6V1E2Q96A05 226 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 PHF21BQ96EK2 531 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 RMND5BQ96G75 393 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 VPS11Q9H270 941 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 JKAMPQ9P055 326 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 MTRF1LQ9UGC7 380 aaKnown RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 FETUBQ9UGM5 382 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 ZNF639Q9UID6 485 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 FOXD3Q9UJU5 478 aaPredicted RBP15.25■□□□□ 0.03
TRIM13-208ENST00000478111 CAMK2AQ9UQM7 478 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 PLEKHA6Q9Y2H5 1048 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 PCDHA9Q9Y5H5 950 aa15.25■□□□□ 0.03
TRIM13-208ENST00000478111 STX16-NPEPL1H3BU86 382 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 STX16O14662 325 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 GNB5O14775 395 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 PPM1BO75688 479 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 NAGAP17050 411 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 NT5EP21589 574 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 TACR1P25103 407 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 MASP1P48740 699 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 CCNG1P51959 295 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 AGFG1P52594 562 aaKnown RBP15.24■□□□□ 0.03
TRIM13-208ENST00000478111 DUSP2Q05923 314 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 MAP4K2Q12851 820 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 CCNYL2Q5T2Q4 361 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 SLC48A1Q6P1K1 146 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 RPS27LQ71UM5 84 aaKnown RBP15.24■□□□□ 0.03
TRIM13-208ENST00000478111 CHDHQ8NE62 594 aaPredicted RBP15.24■□□□□ 0.03
TRIM13-208ENST00000478111 TRPC4APQ8TEL6 797 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 ABTB1Q969K4 478 aaPredicted RBP15.24■□□□□ 0.03
TRIM13-208ENST00000478111 ISL2Q96A47 359 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 HSPBAP1Q96EW2 488 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 TRIB1Q96RU8 372 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 NODALQ96S42 347 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 FUT8Q9BYC5 575 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 ACSS3Q9H6R3 686 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 FARSBQ9NSD9 589 aaKnown RBP15.24■□□□□ 0.03
TRIM13-208ENST00000478111 NINJ2Q9NZG7 142 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 MAT2BQ9NZL9 334 aa15.24■□□□□ 0.03
TRIM13-208ENST00000478111 DNHD1Q96M86 4753 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 PCNX3Q9H6A9 2034 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 PPP6CO00743 305 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 HOXB4P17483 251 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 SLCO1A2P46721 670 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 RPP38P78345 283 aaKnown RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 GALNT1Q10472 559 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 EXOSC7Q15024 291 aaKnown RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 NNATQ16517 81 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 GGTA1PQ4G0N0 100 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 C10orf62Q5T681 223 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 PAGE2Q7Z2X7 111 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 NUP54Q7Z3B4 507 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 COMMD6Q7Z4G1 85 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 YRDCQ86U90 279 aaKnown RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 VWA5B2Q8N398 1253 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 FAM83FQ8NEG4 500 aaPredicted RBP15.23■□□□□ 0.03
TRIM13-208ENST00000478111 OR4F6Q8NGB9 312 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 OR1J4Q8NGS1 313 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 TM4SF18Q96CE8 201 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 CTHRC1Q96CG8 243 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 MBD6Q96DN6 1003 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 LRRC46Q96FV0 321 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 ITPAQ9BY32 194 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 CALHM2Q9HA72 323 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 DLL4Q9NR61 685 aa15.23■□□□□ 0.03
TRIM13-208ENST00000478111 AHSPQ9NZD4 102 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms