RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 ACOX3O15254 700 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 MFSD11O43934 449 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 EEDO75530 441 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ZMPSTE24O75844 475 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SORBS2O94875 1100 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SNX4O95219 450 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TRIM16O95361 564 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 MLYCDO95822 493 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CHRNGP07510 517 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CNPP09543 421 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CDH1P12830 882 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 LBPP18428 481 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 GPX3P22352 226 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 WARSP23381 471 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 EEF1DP29692 281 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 RPL9P32969 192 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 GRIA1P42261 906 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ARCN1P48444 511 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SULT1E1P49888 294 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 RAD23AP54725 363 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 KCNK10P57789 538 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TPI1P60174 286 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 HERVK_113P63132 956 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ARL16Q0P5N6 197 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 MAD2L1Q13257 205 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 PMS2P3Q13401 168 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SELPLGQ14242 412 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CLPPQ16740 277 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CA9Q16790 459 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ZNF181Q2M3W8 571 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SETMARQ53H47 684 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TECRLQ5HYJ1 363 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 PPM1LQ5SGD2 360 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 WSCD1Q658N2 575 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 PM20D1Q6GTS8 502 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 NANOGP8Q6NSW7 305 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 NEPROQ6NW34 567 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 METTL2BQ6P1Q9 378 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TTC23LQ6PF05 361 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 LRRC8DQ7L1W4 858 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 PRSS48Q7RTY5 328 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CMC1Q7Z7K0 106 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CENPLQ8N0S6 344 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TMEM86AQ8N2M4 240 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CCNYL1Q8N7R7 359 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 POC1AQ8NBT0 407 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 DNAAF1Q8NEP3 725 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SLC2A14Q8TDB8 520 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 PHF10Q8WUB8 498 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TMEM170AQ8WVE7 144 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 STARD8Q92502 1023 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 FCGR1BQ92637 280 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 USP13Q92995 863 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TMIGD2Q96BF3 282 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 RMDN1Q96DB5 314 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 C19orf60Q96EN9 201 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SCMH1Q96GD3 660 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SH3YL1Q96HL8 342 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CEP295NLQ96MC4 621 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CCDC115Q96NT0 180 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 DACH2Q96NX9 599 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 DEFB118Q96PH6 123 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 NPAS2Q99743 824 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SLC29A1Q99808 456 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 RBM4BQ9BQ04 359 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TBL1YQ9BQ87 522 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 MED10Q9BTT4 135 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 RBM4Q9BWF3 364 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ERVK-6Q9BXR3 956 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SHCBP1LQ9BZQ2 653 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SEMA6AQ9H2E6 1030 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 POMKQ9H5K3 350 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TFB2MQ9H5Q4 396 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 MAGIXQ9H6Y5 334 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SYNDIG1Q9H7V2 258 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 GORASP2Q9H8Y8 452 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 POLR1BQ9H9Y6 1135 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 DIABLOQ9NR28 239 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 IARS2Q9NSE4 1012 aaKnown RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TREX1Q9NSU2 369 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 PAK1IP1Q9NWT1 392 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 COMMD8Q9NX08 183 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ANKRD10Q9NXR5 420 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 GTSE1Q9NYZ3 720 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CCDC167Q9P0B6 97 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SPATA7Q9P0W8 599 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 IFT80Q9P2H3 777 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SUN2Q9UH99 717 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 LEF1Q9UJU2 399 aaPredicted RBP4.29□□□□□ -1.72
LMBR1-216ENST00000477983 FBXW11Q9UKB1 542 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TPRKBQ9Y3C4 175 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 NAALAD2Q9Y3Q0 740 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 ORC6Q9Y5N6 252 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 CPQQ9Y646 472 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 SCN1AP35498 2009 aa4.29□□□□□ -1.72
LMBR1-216ENST00000477983 TSC2P49815 1807 aa4.28□□□□□ -1.72
LMBR1-216ENST00000477983 FRMPD3Q5JV73 1810 aa4.28□□□□□ -1.72
LMBR1-216ENST00000477983 C1orf232A0A0U1RR37 186 aa4.28□□□□□ -1.72
LMBR1-216ENST00000477983 CLDN24A6NM45 220 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms