RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CYB561P49447 251 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 AGTR2P50052 363 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 HNRNPFP52597 415 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ADARP55265 1226 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 OR4D2P58180 307 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TBPL1P62380 186 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 AP2B1P63010 937 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ABATP80404 500 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 MPP1Q00013 466 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 LTBQ06643 244 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ACTN3Q08043 901 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SNX1Q13596 522 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PTK6Q13882 451 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TRIM25Q14258 630 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 RPS6KA1Q15418 735 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 GXYLT1Q4G148 440 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 XKR6Q5GH73 641 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CT83Q5H943 113 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 AARS2Q5JTZ9 985 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SEM1Q6ZVN7 128 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ADCK2Q7Z695 626 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM200AQ86VY9 491 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 LRRC6Q86X45 466 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CNGA4Q8IV77 575 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 DENND6AQ8IWF6 608 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CCDC170Q8IYT3 715 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SLC5A8Q8N695 610 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PRELID2Q8N945 189 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 WFDC11Q8NEX6 87 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PPHLN1Q8NEY8 458 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 OR5M9Q8NGP3 310 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CD200R1Q8TD46 325 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ASB5Q8WWX0 329 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 RND1Q92730 232 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SLCO2A1Q92959 643 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TBC1D20Q96BZ9 403 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ARSGQ96EG1 525 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SMIM10Q96HG1 83 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 HES6Q96HZ4 224 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 FOPNLQ96NB1 174 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 OR4K3Q96R72 315 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 LPAR4Q99677 370 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 GPATCH1Q9BRR8 931 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 CNPPD1Q9BV87 410 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TSSK1BQ9BXA7 367 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 KLHL31Q9H511 634 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 ZDHHC11Q9H8X9 412 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 LIN28AQ9H9Z2 209 aaKnown RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 KCNJ16Q9NPI9 418 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 SEMA4BQ9NPR2 832 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM184CQ9NVA4 438 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 COQ3Q9NZJ6 369 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 FAM30AQ9NZY2 134 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 C19orf25Q9UFG5 118 aaPredicted RBP4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PDE10AQ9Y233 779 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 PLCE1Q9P212 2302 aa4.23□□□□□ -1.73
CKS1B-207ENST00000477676 TRBV11-1A0A0K0K1C0 115 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 ZCWPW2A0A1B0GU75 182 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 FAM166BA8MTA8 275 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 FOXO6A8MYZ6 492 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 F8W8V4 182 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 KPNA5O15131 536 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 FAM155BO75949 473 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 GLSO94925 669 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 OR6B1O95007 311 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 CCNDBP1O95273 360 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 MLYCDO95822 493 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 SYF2O95926 243 aaKnown RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 TBX6O95947 436 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 IGHG3P01860 377 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 CATP04040 527 aaKnown RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 TPM3P06753 285 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 MPC1LP0DKB6 136 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 ENPP1P22413 925 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 GCSHP23434 173 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 ACVR2AP27037 513 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 GABRB3P28472 473 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 STIP1P31948 543 aaKnown RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 PPARGP37231 505 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 KCNJ1P48048 391 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 WNT3P56703 355 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 RPS15AP62244 130 aaKnown RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 FOLH1Q04609 750 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 FOXO1Q12778 655 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 MYBPHQ13203 477 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 CTBP1Q13363 440 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 NAE1Q13564 534 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 NAA25Q14CX7 972 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 NDUFA9Q16795 377 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 PHKG1Q16816 387 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 DEFB134Q4QY38 66 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 ANKRD22Q5VYY1 191 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM198Q66K66 360 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 KIAA0930Q6ICG6 404 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 CAPN13Q6MZZ7 669 aaPredicted RBP4.22□□□□□ -1.73
CKS1B-207ENST00000477676 ARSKQ6UWY0 536 aa4.22□□□□□ -1.73
CKS1B-207ENST00000477676 QSOX2Q6ZRP7 698 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms