RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 TFEBP19484 476 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 CMPK1P30085 196 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 HSD17B3P37058 310 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 CASP2P42575 452 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SLC12A2P55011 1212 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 UCNP55089 124 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 HOXA4Q00056 320 aaPredicted RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 REEP5Q00765 189 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 GPS2Q13227 327 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 CSHL1Q14406 222 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TGIF1Q15583 401 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SMN1Q16637 294 aaKnown RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 DEFB110Q30KQ9 67 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 PRAMEF17Q5VTA0 474 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 FRMPD2BQ6IN97 320 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 CAPN13Q6MZZ7 669 aaPredicted RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 TLDC1Q6P9B6 456 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 INO80CQ6PI98 192 aaPredicted RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 FIGLAQ6QHK4 219 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TAOK1Q7L7X3 1001 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 LRRC70Q7Z2Q7 622 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TBC1D1Q86TI0 1168 aaPredicted RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 ADGRG3Q86Y34 549 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 KRT73Q86Y46 540 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 DSELQ8IZU8 1212 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TCAIMQ8N3R3 496 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SPATA6LQ8N4H0 392 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 C2orf73Q8N5S3 287 aaPredicted RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 ESX1Q8N693 406 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 ZNF527Q8NB42 609 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 STAG3L4Q8TBR4 150 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 ACMSDQ8TDX5 336 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 KCTD4Q8WVF5 259 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 NEIL2Q969S2 332 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TM4SF19Q96DZ7 209 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SLC45A3Q96JT2 553 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 C10orf90Q96M02 699 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 HAUS8Q9BT25 410 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 DPH7Q9BTV6 452 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TMEM109Q9BVC6 243 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 ULBP3Q9BZM4 244 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SPNS1Q9H2V7 528 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 EHD1Q9H4M9 534 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 PRORYQ9H606 182 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 FANCEQ9HB96 536 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 NMRAL1Q9HBL8 299 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 MRPS30Q9NP92 439 aaKnown RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 OBP2BQ9NPH6 170 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 LHX9Q9NQ69 397 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SLC22A11Q9NSA0 550 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 TMEM184CQ9NVA4 438 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 SOHLH2Q9NX45 425 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 ARL15Q9NXU5 204 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 ASIC5Q9NY37 505 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 PSMC3IPQ9P2W1 217 aaPredicted RBP4.93□□□□□ -1.62
VPS45-207ENST00000477558 LGALS13Q9UHV8 139 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 KLHL20Q9Y2M5 609 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 ACOT9Q9Y305 439 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 DTNAQ9Y4J8 743 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 AP1M2Q9Y6Q5 423 aa4.93□□□□□ -1.62
VPS45-207ENST00000477558 PRRC2CQ9Y520 2896 aaKnown RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 IGLV3-12A0A075B6K2 115 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 LOC105369274A0A096LPK9 316 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 LOC102723532A0A0G2JNH3 316 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 LOC101059948A0A1B0GTJ6 334 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 A0A1W2PQ72 361 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 TRBC2A0A5B9 178 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 A8MVJ9 347 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 TRIM49D1C9J1S8 452 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 E7EQ34 232 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 H0YGG7 62 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 M0R3H8 397 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 P2RX6O15547 441 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 ZNF749O43361 778 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 CDH16O75309 829 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 OR2B3O76000 313 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 JTBO76095 146 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 KIAA0754O94854 1291 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 SYF2O95926 243 aaKnown RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 TBX6O95947 436 aaPredicted RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 RPS17P08708 135 aaKnown RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 ANXA5P08758 320 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 SNRPAP09012 282 aaKnown RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 HBQ1P09105 142 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 RAB40ALP0C0E4 278 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 HIST1H2AGP0C0S8 130 aaPredicted RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 LIFP15018 202 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 CD22P20273 847 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 HIST1H2ADP20671 130 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 SAT1P21673 171 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 F8A1P23610 371 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 TYK2P29597 1187 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 RPA3P35244 121 aaPredicted RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 AHRP35869 848 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 MSH2P43246 934 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 ELLP55199 621 aaPredicted RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 ARF3P61204 181 aaPredicted RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 FOXM1Q08050 763 aa4.92□□□□□ -1.62
VPS45-207ENST00000477558 SRSF6Q13247 344 aaKnown RBP4.92□□□□□ -1.62
VPS45-207ENST00000477558 NAE1Q13564 534 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms