RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TBCD	Q9BTW9	1192 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC29A3	Q9BZD2	475 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SPRTN	Q9H040	489 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MID1IP1	Q9NPA3	183 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	INTS9	Q9NV88	658 aa	Known RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C14orf105	Q9NVL8	296 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MS4A12	Q9NXJ0	267 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SIDT1	Q9NXL6	827 aa	Known RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PCTP	Q9UKL6	214 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PSME2	Q9UL46	239 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GPR45	Q9Y5Y3	372 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC22A7	Q9Y694	548 aa		4.25	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TRGV11	A0A075B6L2	103 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LOC105369274	A0A096LPK9	316 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LOC102723532	A0A0G2JNH3	316 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		A0A1W2PS29	197 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MED19	A0JLT2	244 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DNAJC9-AS1	A6NH13	148 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TRPC5OS	A6NMA1	111 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CDRT15L2	A8MXV6	281 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		H0YIG0	161 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289		H0YIV9	168 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC28A1	O00337	649 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FOXE1	O00358	373 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	AZIN1	O14977	448 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ERI3	O43414	337 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TYROBP	O43914	113 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PEX1	O43933	1283 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CTSV	O60911	334 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR4F21	O95013	312 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NSA2	O95478	260 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CAPN1	P07384	714 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	HEXB	P07686	556 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BPGM	P07738	259 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	UROS	P10746	265 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	RNH1	P13489	461 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ALOX12	P18054	663 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TSPAN8	P19075	237 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NR1D1	P20393	614 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PPP2R1B	P30154	601 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DLST	P36957	453 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ETV5	P41161	510 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SLC1A6	P48664	564 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PDX1	P52945	283 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PLA2G16	P53816	162 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MTTP	P55157	894 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CDH13	P55290	713 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ABCE1	P61221	599 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	BTN3A2	P78410	334 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ACTN3	Q08043	901 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ACSM2A	Q08AH3	577 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GALNT1	Q10472	559 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CSTF3	Q12996	717 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MAD2L1	Q13257	205 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CUL3	Q13618	768 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PCLAF	Q15004	111 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CHI3L2	Q15782	390 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZIC1	Q15915	447 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C18orf21	Q32NC0	220 aa	Predicted RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TUBB8	Q3ZCM7	444 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	GGTA1P	Q4G0N0	100 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NKAIN1	Q4KMZ8	207 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	UNC50	Q53HI1	259 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SPIN4	Q56A73	249 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SGO1	Q5FBB7	561 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SH2D4B	Q5SQS7	431 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	C1orf189	Q5VU69	101 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FRG2	Q64ET8	278 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ACSM2B	Q68CK6	577 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FRMPD2B	Q6IN97	320 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	PWWP2B	Q6NUJ5	590 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NUDT13	Q86X67	352 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZFAND4	Q86XD8	727 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CRLF3	Q8IUI8	442 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WDR75	Q8IWA0	830 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DDIAS	Q8IXT1	998 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	LAS2	Q8IYD9	372 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FAM9C	Q8IZT9	166 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	DSEL	Q8IZU8	1212 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR4N4	Q8N0Y3	316 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	L3MBTL4	Q8NA19	623 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR2L5	Q8NG80	312 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR7G3	Q8NG95	312 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR4F6	Q8NGB9	312 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FAM76A	Q8TAV0	307 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	NT5C	Q8TCD5	201 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	SCARB1	Q8WTV0	552 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FKBP10	Q96AY3	582 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	ZBTB9	Q96C00	473 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TLCD1	Q96CP7	247 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	MTFMT	Q96DP5	389 aa	Known RBP	4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	WDR34	Q96EX3	536 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	TMEM237	Q96Q45	408 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	FRG2B	Q96QU4	278 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR2A5	Q96R48	311 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	OR4K3	Q96R72	315 aa		4.24	□□□□□ -1.73
NSMCE4A-208	ENST00000477289	CCNL2	Q96S94	520 aa	Predicted RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms