RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 UCP1P25874 307 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PSMB6P28072 239 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 EPHA8P29322 1005 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 CASP14P31944 242 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 YWHABP31946 246 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 ACTR1BP42025 376 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PRCPP42785 496 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SLC1A3P43003 542 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 CAPZA2P47755 286 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 LMAN1P49257 510 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 CEBPDP49716 269 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 TMED10P49755 219 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 FHITP49789 147 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ERFP50548 548 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 METAP2P50579 478 aaKnown RBP eCLIP2.28□□□□□ -2.04
XRN1-211ENST00000477237 PSMD4P55036 377 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 ATP5IP56385 69 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 RPS3AP61247 264 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 STX1BP61266 288 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 RPL10AP62906 217 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 RELAQ04206 551 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 FCHO2Q0JRZ9 810 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 CDH17Q12864 832 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MERTKQ12866 999 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TSPAN31Q12999 210 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SCGB2A2Q13296 93 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SNTB2Q13425 540 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 GPR176Q14439 515 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PDK2Q15119 407 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 CYTH1Q15438 398 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 LTB4RQ15722 352 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SGCBQ16585 318 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 C2orf68Q2NKX9 166 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TMEM44Q2T9K0 475 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 CRY2Q49AN0 593 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 IQCCQ4KMZ1 466 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ZC2HC1CQ53FD0 456 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 HIKESHIQ53FT3 197 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ACTBL2Q562R1 376 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 RAB41Q5JT25 222 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 C9orf152Q5JTZ5 239 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 BEND3Q5T5X7 828 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 HES5Q5TA89 166 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 AGBL2Q5U5Z8 902 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 LIPNQ5VXI9 398 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MFSD14CQ5VZR4 134 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 WSCD1Q658N2 575 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SPOPLQ6IQ16 392 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ZNF774Q6NX45 483 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 INO80CQ6PI98 192 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 C17orf99Q6UX52 265 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 NHLRC1Q6VVB1 395 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SH2D5Q6ZV89 423 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 GPRIN3Q6ZVF9 776 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TOM1L2Q6ZVM7 507 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 FRA10AC1Q70Z53 315 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 YRDCQ86U90 279 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 LHFPL3Q86UP9 236 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SERINC5Q86VE9 423 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 FAM228AQ86W67 206 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TDRPQ86YL5 185 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MMAAQ8IVH4 418 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 SLC35F3Q8IY50 421 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 OFCC1Q8IZS5 231 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 KIRREL3Q8IZU9 778 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TRAM1L1Q8N609 369 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ZBTB2Q8N680 514 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 RASGEF1AQ8N9B8 481 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MLKLQ8NB16 471 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 NHLRC2Q8NBF2 726 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 RBM15BQ8NDT2 890 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 BPIFCQ8NFQ6 507 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 OR2L3Q8NG85 312 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SETD6Q8TBK2 473 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SLC2A14Q8TDB8 520 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 DTD1Q8TEA8 209 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 THAP4Q8WY91 577 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PROX1Q92786 737 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 HAS2Q92819 552 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 RFT1Q96AA3 541 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ORAI1Q96D31 301 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ARHGEF26Q96DR7 871 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SENP5Q96HI0 755 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 LURAP1Q96LR2 239 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 C12orf66Q96MD2 445 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SPATA13Q96N96 652 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 FOXN4Q96NZ1 517 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ZNF317Q96PQ6 595 aaPredicted RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 TAAR1Q96RJ0 339 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PKP2Q99959 881 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 BPIFA3Q9BQP9 254 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SYT11Q9BT88 431 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TPPP3Q9BW30 176 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 PAPOLGQ9BWT3 736 aaKnown RBP2.28□□□□□ -2.04
XRN1-211ENST00000477237 CACNG6Q9BXT2 260 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 ANGPTL4Q9BY76 406 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 MFFQ9GZY8 342 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 SLC22A4Q9H015 551 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 TOLLIPQ9H0E2 274 aa2.28□□□□□ -2.04
XRN1-211ENST00000477237 DDX47Q9H0S4 455 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms