RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ATP5J2P56134 94 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 GFRA1P56159 465 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 NRG3P56975 720 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 CYP1B1Q16678 543 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 CDKL4Q5MAI5 379 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 DEPDC1Q5TB30 811 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 HLA-DQA1Q5Y7H0 255 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 DESI1Q6ICB0 168 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SULT1C3Q6IMI6 304 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SLC30A6Q6NXT4 461 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 TMEM81Q6P7N7 255 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 VWA1Q6PCB0 445 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SCIMPQ6UWF3 145 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 GRAMD2AQ8IUY3 354 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 LAS2Q8IYD9 372 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 ZCCHC7Q8N3Z6 543 aaKnown RBP10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SPATA6LQ8N4H0 392 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 ZNF615Q8N8J6 731 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 WDSUB1Q8N9V3 476 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 MAPK1IP1LQ8NDC0 245 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 C17orf47Q8NEP4 570 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 OR14L1PQ8NHC6 308 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 CMTM7Q96FZ5 175 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 DERL2Q9GZP9 239 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 RBSNQ9H1K0 784 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 METTL7AQ9H8H3 244 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 CXorf21Q9HAI6 301 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 SERHLQ9NQF3 203 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 ADGRE2Q9UHX3 823 aa10.3□□□□□ -0.76
BRCA1-213ENST00000476777 EXO1Q9UQ84 846 aaKnown RBP10.3□□□□□ -0.76
BRCA1-213ENST00000476777 PLCE1Q9P212 2302 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 A0A1W2PR48 441 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 A0A1W2PS29 197 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 LRRC14BA6NHZ5 514 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RNF223E7ERA6 249 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 C16orf97H3BN30 126 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 PLPP1O14494 284 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 HCRTR2O43614 444 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ICOSLGO75144 302 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 PPM1BO75688 479 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 CBR3O75828 277 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 WISP3O95389 354 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 CRHP06850 196 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RHOXF2BP0C7M4 288 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 PCNAP12004 261 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ZNF708P17019 499 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 BUD31P41223 144 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 CLDN18P56856 261 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RPS13P62277 151 aaKnown RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 KBTBD12Q3ZCT8 623 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 HP1BP3Q5SSJ5 553 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 STEAP4Q687X5 459 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 MED27Q6P2C8 311 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 BTLAQ7Z6A9 289 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 GPSM1Q86YR5 675 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 HIPK1Q86Z02 1210 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RNF175Q8N4F7 328 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 CNEP1R1Q8N9A8 125 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 OR7G3Q8NG95 312 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RDH11Q8TC12 318 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 TMEM171Q8WVE6 324 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 HGDQ93099 445 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 UBE2E3Q969T4 207 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RGMAQ96B86 450 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 PGM2Q96G03 612 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 CFAP36Q96G28 342 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ZC3HAV1LQ96H79 300 aaKnown RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 NODALQ96S42 347 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ZNF717Q9BY31 904 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 OPN3Q9H1Y3 402 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 OR10A5Q9H207 317 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 CXorf56Q9H5V9 222 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ACTR8Q9H981 624 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 GALNT9Q9HCQ5 603 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 PRM3Q9NNZ6 103 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 LZTFL1Q9NQ48 299 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ELOVL5Q9NYP7 299 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 PTBP2Q9UKA9 531 aaKnown RBP10.29□□□□□ -0.76
BRCA1-213ENST00000476777 RNF112Q9ULX5 631 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 MAPRE3Q9UPY8 281 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 DLGAP4Q9Y2H0 992 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 ASB4Q9Y574 426 aa10.29□□□□□ -0.76
BRCA1-213ENST00000476777 SVEP1Q4LDE5 3571 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 A0A087X1B8 175 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 A0A0A6YYD5 115 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 TMPRSS11DO60235 418 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 CCNT2O60583 730 aaKnown RBP10.28□□□□□ -0.76
BRCA1-213ENST00000476777 TMCC2O75069 709 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 EEDO75530 441 aaKnown RBP10.28□□□□□ -0.76
BRCA1-213ENST00000476777 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-213ENST00000476777 CT62P0C5K7 136 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 NR2F6P10588 404 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 POU2F1P14859 743 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 NAGAP17050 411 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 KRT15P19012 456 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 GPX3P22352 226 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 SERPINB1P30740 379 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 ELK3P41970 407 aa10.28□□□□□ -0.76
BRCA1-213ENST00000476777 KIR2DL2P43627 348 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms