RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 DHCR24Q15392 516 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 SLC5A12Q1EHB4 618 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CCSMST1Q4G0I0 132 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 YIF1BQ5BJH7 314 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ZNF628Q5EBL2 1059 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 XKR6Q5GH73 641 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ENTPD8Q5MY95 495 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TIGD3Q6B0B8 471 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 MED27Q6P2C8 311 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TRIM40Q6P9F5 258 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 XKRXQ6PP77 449 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 HSDL2Q6YN16 418 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 DPY19L3Q6ZPD9 716 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TRILQ7L0X0 811 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TRMT11Q7Z4G4 463 aaKnown RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 NRSN1Q8IZ57 195 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 STX19Q8N4C7 294 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 GDPD1Q8N9F7 314 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 OR9Q2Q8NGE9 314 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 OR8J1Q8NGP2 316 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 OR2A12Q8NGT7 310 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 LILRB4Q8NHJ6 448 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 CREB3L4Q8TEY5 395 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ZNF480Q8WV37 535 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TTC9Q92623 222 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 MAL2Q969L2 176 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 SLC25A46Q96AG3 418 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TRMT61AQ96FX7 289 aaKnown RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 LRIG1Q96JA1 1093 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 MRGPRX3Q96LB0 322 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 Q96MT0 163 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 PKP4Q99569 1192 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ZNF649Q9BS31 505 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 ZSCAN5AQ9BUG6 496 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 EBPLQ9BY08 206 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 NUAK2Q9H093 628 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 TMEM245Q9H330 911 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 FAM83DQ9H4H8 585 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 PPP1R3EQ9H7J1 279 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 NMNAT1Q9HAN9 279 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 SMURF1Q9HCE7 757 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 BCL2L10Q9HD36 194 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 PARD6AQ9NPB6 346 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 KIF17Q9P2E2 1029 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 FAM8A1Q9UBU6 413 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 PLEKHB1Q9UF11 243 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 ZNF229Q9UJW7 825 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 PNMA8BQ9ULN7 279 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.49□□□□□ -1.37
UBR4-212ENST00000475973 CAB39Q9Y376 341 aaPredicted RBP6.49□□□□□ -1.37
UBR4-212ENST00000475973 NOX1Q9Y5S8 564 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 MYO15AQ9UKN7 3530 aa6.49□□□□□ -1.37
UBR4-212ENST00000475973 C17orf113A0A1B0GUU1 675 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 A0A1W2PRQ8 180 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 TRBC2A0A5B9 178 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 TMEM129A0AVI4 362 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 MED19A0JLT2 244 aaPredicted RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 PRAMEF27A3QJZ7 478 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 TMEM202A6NGA9 273 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 J3KTA2 159 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 FAAHO00519 579 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SLC30A4O14863 429 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SSX4O60224 188 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 ENTPD6O75354 484 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 CSO75390 466 aaKnown RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 GADD45GO95257 159 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 C6orf47O95873 294 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SLC16A8O95907 504 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SOD1P00441 154 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 CATP04040 527 aaKnown RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 IRF1P10914 325 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 ACADMP11310 421 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 IL7P13232 177 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 ITPKAP23677 461 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SOX6P35712 828 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 MPLP40238 635 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 CDH12P55289 794 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 RPS13P62277 151 aaKnown RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 MRPS21P82921 87 aaKnown RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 C19orf57Q0VDD7 668 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 NAE1Q13564 534 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 LARS2Q15031 903 aaKnown RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 CDK10Q15131 360 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SPHARQ15513 63 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 BAK1Q16611 211 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 TSTQ16762 297 aaKnown RBP6.48□□□□□ -1.37
UBR4-212ENST00000475973 DUSP7Q16829 419 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 C3orf38Q5JPI3 329 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SPANXN2Q5MJ10 180 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 EOGTQ5NDL2 527 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 SLC35F1Q5T1Q4 408 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 ATAD3CQ5T2N8 411 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 CCNJQ5T5M9 372 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 PRAMEF8Q5VWM4 474 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 PRAMEF7Q5VXH5 474 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 NXNL2Q5VZ03 156 aa6.48□□□□□ -1.37
UBR4-212ENST00000475973 ADNP2Q6IQ32 1131 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms