RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	KRTAP16-1	A8MUX0	517 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	TCP11X1	B4DZS4	312 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912		D6RAR5	112 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SLC31A1	O15431	190 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	NDUFS4	O43181	175 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ARHGEF9	O43307	516 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	DUX1	O43812	170 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	RNASEH1	O60930	286 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CRLF1	O75462	422 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	EML2	O95834	649 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CSF2	P04141	144 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ATP5B	P06576	529 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	TPO	P07202	933 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	FRMD6-AS1	P0C7T7	363 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CCDC130	P13994	396 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	OAS2	P29728	719 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CEACAM8	P31997	349 aa	Predicted RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	WNT5A	P41221	380 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CAPZA2	P47755	286 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	MAP3K7CL	P57077	242 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ORC2	Q13416	577 aa	Predicted RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SNTB1	Q13884	538 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	FZD2	Q14332	565 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	TPRG1L	Q5T0D9	272 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	GCNT6	Q5T4J0	391 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ATP1A1-AS1	Q5TC04	95 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	OR6B2	Q6IFH4	312 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	BHLHB9	Q6PI77	547 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	KRT77	Q7Z794	578 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	STK40	Q8N2I9	435 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	NECAB1	Q8N987	351 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ZNF383	Q8NA42	475 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SLC2A14	Q8TDB8	520 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	LPGAT1	Q92604	370 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	KLK6	Q92876	244 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SMARCD1	Q96GM5	515 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	PRAC1	Q96KF2	57 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	LINC00479	Q96M42	142 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CBWD1	Q9BRT8	395 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	MED10	Q9BTT4	135 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CCDC106	Q9BWC9	280 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	PPIL3	Q9H2H8	161 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ST6GALNAC4	Q9H4F1	302 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	FBXO44	Q9H4M3	255 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SMYD3	Q9H7B4	428 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	PARVG	Q9HBI0	331 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	CSNK1G1	Q9HCP0	422 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	TMEM181	Q9P2C4	612 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SUN2	Q9UH99	717 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ZNF510	Q9Y2H8	683 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	WBP11	Q9Y2W2	641 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	SPIN1	Q9Y657	262 aa	Predicted RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	NAV3	Q8IVL0	2385 aa		4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.11	□□□□□ -1.75
PRKD3-208	ENST00000475912	EDDM13	A0A1B0GTR0	161 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	MEIOC	A2RUB1	952 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	AQP9	O43315	295 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	BCL10	O95999	233 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	IL1B	P01584	269 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	TNNC2	P02585	160 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	RPLP0	P05388	317 aa	Known RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	PRKAR1A	P10644	381 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	POLR2E	P19388	210 aa	Known RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	NUDT1	P36639	197 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CSK	P41240	450 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	NUMB	P49757	651 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	STK19	P49842	368 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ARSE	P51690	589 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	SNRPE	P62304	92 aa	Known RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	TNNC1	P63316	161 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CCL7	P80098	99 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ZFP36L1	Q07352	338 aa	Known RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CDC20	Q12834	499 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CNTN1	Q12860	1018 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	PLA2G7	Q13093	441 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	IL11RA	Q14626	422 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	MPPE1	Q53F39	396 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	PRR30	Q53SZ7	412 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	LCE3C	Q5T5A8	94 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ADAMTSL4-AS1	Q5T5F5	129 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CORO6	Q6QEF8	472 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912		Q6ZSR6	202 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CLEC20A	Q6ZU45	233 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	STXBP4	Q6ZWJ1	553 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ZNF720	Q7Z2F6	126 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	TIPARP	Q7Z3E1	657 aa	Known RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ABI3BP	Q7Z7G0	1075 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ACOT1	Q86TX2	421 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	LDB1	Q86U70	411 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	GPBP1	Q86WP2	473 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	CBWD2	Q8IUF1	395 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	C12orf29	Q8N999	325 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	OR2T6	Q8NHC8	308 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	LMX1A	Q8TE12	382 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	PTER	Q96BW5	349 aa		4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.1	□□□□□ -1.75
PRKD3-208	ENST00000475912	ANKRD36BP1	Q96IX9	119 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms