RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
TRIM11-203ENST00000475775 SH2D2AQ9NP31 389 aa13.59□□□□□ -0.23
TRIM11-203ENST00000475775 ACKR4Q9NPB9 350 aa13.59□□□□□ -0.23
TRIM11-203ENST00000475775 DLL4Q9NR61 685 aa13.59□□□□□ -0.23
TRIM11-203ENST00000475775 ERVK-19Q9WJR5 959 aa13.59□□□□□ -0.23
TRIM11-203ENST00000475775 HRNRQ86YZ3 2850 aaPredicted RBP13.59□□□□□ -0.23
TRIM11-203ENST00000475775 ZNF407Q9C0G0 2248 aa13.59□□□□□ -0.23
TRIM11-203ENST00000475775 A0A0G2JNJ9 132 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 HSPB2A8KAH6 182 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 TP53I11O14683 189 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 GPR75O95800 540 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 CELA3AP09093 270 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 SBK3P0C264 359 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 FBXO45P0C2W1 286 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 FOSL1P15407 271 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 NR0B1P51843 470 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 HNRNPH2P55795 449 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 RPS13P62277 151 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 GTF2H2Q13888 395 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 EBPQ15125 230 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 SF3B4Q15427 424 aaKnown RBP eCLIP13.58□□□□□ -0.243e-7■■□□□ 14.4
TRIM11-203ENST00000475775 HSPB2Q16082 182 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 C18orf63Q68DL7 685 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 OR52E8Q6IFG1 317 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 GTF2H2CQ6P1K8 395 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 WDR53Q7Z5U6 358 aaPredicted RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 LRRC25Q8N386 305 aaPredicted RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 TMEM151AQ8N4L1 468 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 MZB1Q8WU39 189 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 PHF21BQ96EK2 531 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 JSRP1Q96MG2 331 aaPredicted RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 MRPL57Q9BQC6 102 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 SORBS1Q9BX66 1292 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 WWTR1Q9GZV5 400 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 MRPL46Q9H2W6 279 aaKnown RBP13.58□□□□□ -0.24
TRIM11-203ENST00000475775 ALKBH4Q9NXW9 302 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 Q9UFV3 132 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 TMCO1Q9UM00 188 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 EDARQ9UNE0 448 aa13.58□□□□□ -0.24
TRIM11-203ENST00000475775 FN1P02751 2386 aaKnown RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 A0A0A6YYD5 115 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 SMIM23A6NLE4 172 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 STX16-NPEPL1H3BU86 382 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 STX16O14662 325 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 PROM1O43490 865 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 FAM58BPP0C7Q3 252 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 CHN1P15882 459 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 ARL1P40616 181 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 SLCO1A2P46721 670 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 NRG3P56975 720 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 SLC37A1P57057 533 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 ZNF267Q14586 743 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 RPS6KA2Q15349 733 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 CEBPEQ15744 281 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 NTRK2Q16620 822 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 C10orf62Q5T681 223 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 HLA-DQA1Q5Y7H0 255 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 TMEM198Q66K66 360 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 LYPD8Q6UX82 237 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 Q71RC1 249 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 PM20D2Q8IYS1 436 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 RNF175Q8N4F7 328 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 OR10G3Q8NGC4 313 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 NEIL3Q8TAT5 605 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 NINJ1Q92982 152 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 TP53INP1Q96A56 240 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 MDFIQ99750 246 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 DDX31Q9H8H2 851 aaKnown RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 IPPKQ9H8X2 491 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 SEMA4BQ9NPR2 832 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 PCTPQ9UKL6 214 aa13.57□□□□□ -0.24
TRIM11-203ENST00000475775 CHCHD2Q9Y6H1 151 aaPredicted RBP13.57□□□□□ -0.24
TRIM11-203ENST00000475775 C2orf92A0A1B0GVN3 265 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 ANKRD33BA6NCL7 494 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 HRKO00198 91 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 FOXE1O00358 373 aaPredicted RBP13.56□□□□□ -0.24
TRIM11-203ENST00000475775 OR7A17O14581 309 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 DVL2O14641 736 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 SMIM24O75264 130 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 SEMA3DO95025 777 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 SNX4O95219 450 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 RPS17P08708 135 aaKnown RBP13.56□□□□□ -0.24
TRIM11-203ENST00000475775 SLC35E2P0CK97 266 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 ENDOUP21128 410 aaKnown RBP13.56□□□□□ -0.24
TRIM11-203ENST00000475775 GDF1P27539 372 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 CPSF6Q16630 551 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRIM11-203ENST00000475775 RTL6Q6ICC9 239 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 MRM1Q6IN84 353 aaKnown RBP13.56□□□□□ -0.24
TRIM11-203ENST00000475775 ARSKQ6UWY0 536 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 CPLX4Q7Z7G2 160 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 TRABD2AQ86V40 505 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 GALNT12Q8IXK2 581 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 L3MBTL4Q8NA19 623 aa13.56□□□□□ -0.24
TRIM11-203ENST00000475775 OR52B6Q8NGF0 335 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms