RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 MARCH9Q86YJ5 346 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 NEIL3Q8TAT5 605 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 SLC7A13Q8TCU3 470 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 ACOT12Q8WYK0 555 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 HGDQ93099 445 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 RNF32Q9H0A6 362 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 PLXNB3Q9ULL4 1909 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 A0A1W2PRB8 838 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 SHISA3A0PJX4 238 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 LIMS3P0CW19 117 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 LIMS4P0CW20 117 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 ATF4P18848 351 aaPredicted RBP16.78■□□□□ 0.28
CCM2-207ENST00000475551 IL32P24001 234 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 CSNK1DP48730 415 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 SRP54P61011 504 aaKnown RBP16.78■□□□□ 0.28
CCM2-207ENST00000475551 C2orf80Q0P641 193 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 EXOSC2Q13868 293 aaKnown RBP16.78■□□□□ 0.28
CCM2-207ENST00000475551 RPS26P11Q5JNZ5 115 aaPredicted RBP16.78■□□□□ 0.28
CCM2-207ENST00000475551 AGTRAPQ6RW13 159 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 PLEKHM3Q6ZWE6 761 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 PRICKLE2Q7Z3G6 844 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 LUZP2Q86TE4 346 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 ALG14Q96F25 216 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 CLEC4MQ9H2X3 399 aaPredicted RBP16.78■□□□□ 0.28
CCM2-207ENST00000475551 EXTL2Q9UBQ6 330 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 UBQLN2Q9UHD9 624 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 FKBP7Q9Y680 259 aa16.78■□□□□ 0.28
CCM2-207ENST00000475551 VWA8A3KMH1 1905 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 C5orf58C9J3I9 102 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 TBL1XO60907 577 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 NME6O75414 186 aaPredicted RBP16.77■□□□□ 0.28
CCM2-207ENST00000475551 PAHP00439 452 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 ATP1B2P14415 290 aaPredicted RBP16.77■□□□□ 0.28
CCM2-207ENST00000475551 ELK1P19419 428 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 UQCRC2P22695 453 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 CSKP41240 450 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 HSF2Q03933 536 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 CSTF1Q05048 431 aaKnown RBP16.77■□□□□ 0.28
CCM2-207ENST00000475551 ARHGAP15Q53QZ3 475 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 FAM71E1Q6IPT2 247 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 COMMD6Q7Z4G1 85 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 DCAF4L2Q8NA75 395 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 MED8Q96G25 268 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 RSPO3Q9BXY4 272 aaPredicted RBP16.77■□□□□ 0.28
CCM2-207ENST00000475551 A4GALTQ9NPC4 353 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 MYNNQ9NPC7 610 aa16.77■□□□□ 0.28
CCM2-207ENST00000475551 ARHGEF33A8MVX0 844 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 GABRPO00591 440 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 BMP8BP34820 402 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 SEMG2Q02383 582 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 FGFBP1Q14512 234 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 MINDY4Q4G0A6 757 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 CLLU1OSQ5K130 101 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 RAET1GQ6H3X3 334 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 DEF8Q6ZN54 512 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 TPRG1Q6ZUI0 275 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 C16orf62Q7Z3J2 963 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 BMP8AQ7Z5Y6 402 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 ZFP41Q8N8Y5 198 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 PCSK9Q8NBP7 692 aaKnown RBP16.77■□□□□ 0.27
CCM2-207ENST00000475551 C16orf78Q8WTQ4 265 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 SLC38A5Q8WUX1 472 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 WBP2Q969T9 261 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 RFT1Q96AA3 541 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 ASIC4Q96FT7 647 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 ZNF354BQ96LW1 612 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 OR2M2Q96R28 347 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 THAP7Q9BT49 309 aaPredicted RBP16.77■□□□□ 0.27
CCM2-207ENST00000475551 ABCG5Q9H222 651 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 PPA2Q9H2U2 334 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 BRD9Q9H8M2 597 aa16.77■□□□□ 0.27
CCM2-207ENST00000475551 STOX2Q9P2F5 926 aaPredicted RBP16.77■□□□□ 0.27
CCM2-207ENST00000475551 ZNF840PA6NDX5 716 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 TPPPO94811 219 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 APOL3O95236 402 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 IRF1P10914 325 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 DDCP20711 480 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 BTCP35070 178 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 SMSP52788 366 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 ACLYP53396 1101 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 PNLIPRP1P54315 467 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 RPA4Q13156 261 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 LGALSLQ3ZCW2 172 aaPredicted RBP16.76■□□□□ 0.27
CCM2-207ENST00000475551 MED27Q6P2C8 311 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 SERPINA13PQ6UXR4 307 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 RSPO2Q6UXX9 243 aaPredicted RBP16.76■□□□□ 0.27
CCM2-207ENST00000475551 SLC36A4Q6YBV0 504 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 DNAJB7Q7Z6W7 309 aaPredicted RBP16.76■□□□□ 0.27
CCM2-207ENST00000475551 ADGRD2Q7Z7M1 963 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 ARMC5Q96C12 935 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 ZSWIM3Q96MP5 696 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 DPCDQ9BVM2 203 aaPredicted RBP16.76■□□□□ 0.27
CCM2-207ENST00000475551 NLNQ9BYT8 704 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 MVB12BQ9H7P6 319 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 FBXW2Q9UKT8 454 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 CLCA2Q9UQC9 943 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
CCM2-207ENST00000475551 LANCL1O43813 399 aa16.76■□□□□ 0.27
CCM2-207ENST00000475551 GBAP04062 536 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms