RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 QPCTLQ9NXS2 382 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 MAT2BQ9NZL9 334 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 CRIM1Q9NZV1 1036 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 HEY2Q9UBP5 337 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF180Q9UJW8 692 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ADAM29Q9UKF5 820 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 BOKQ9UMX3 212 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 PCDHGB3Q9Y5G1 929 aa6.42□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF469Q96JG9 3925 aaPredicted RBP6.42□□□□□ -1.38
HDAC3-207ENST00000475549 C15orf38-AP3S2A0A0A6YYH1 394 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 C17orf51A8MQB3 221 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 A8MT66 165 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 FOXO6A8MYZ6 492 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 TRIM49D1C9J1S8 452 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 POC1B-GALNT4F8VUJ3 575 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 DLX3O60479 287 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 ICOSLGO75144 302 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PPM1BO75688 479 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 URI1O94763 535 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 INHBAP08476 426 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 COL6A2P12110 1019 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 GABRA1P14867 456 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PORP16435 677 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 NT5EP21589 574 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 BMP5P22003 454 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 GDF1P27539 372 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PHBP35232 272 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 SLCO1A2P46721 670 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 EMDP50402 254 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 AGFG1P52594 562 aaKnown RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 MAPK12P53778 367 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 RAE1P78406 368 aaKnown RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PHEXP78562 749 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 MRPS35P82673 323 aaKnown RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 IFT88Q13099 833 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 LTB4RQ15722 352 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 SLC25A35Q3KQZ1 300 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 ACSF3Q4G176 576 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 UNC50Q53HI1 259 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 NHSL2Q5HYW2 709 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 WIPI1Q5MNZ9 446 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 CES4AQ5XG92 561 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 TMEM198Q66K66 360 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 TIGD3Q6B0B8 471 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 TTC19Q6DKK2 380 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 KLC3Q6P597 504 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PLXDC2Q6UX71 529 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 WDR53Q7Z5U6 358 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PACS2Q86VP3 889 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 ZZZ3Q8IYH5 903 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 CLYBLQ8N0X4 340 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 OR7G1Q8NGA0 311 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 OR52R1Q8NGF1 315 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 ANP32BQ92688 251 aaKnown RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 C11orf24Q96F05 449 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 CNRIP1Q96F85 164 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 WDYHV1Q96HA8 205 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 C16orf45Q96MC5 204 aaPredicted RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 SECISBP2Q96T21 854 aaKnown RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 G6PC3Q9BUM1 346 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 ITPAQ9BY32 194 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 UGT2B28Q9BY64 529 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 MRPL46Q9H2W6 279 aaKnown RBP6.41□□□□□ -1.38
HDAC3-207ENST00000475549 EPB41L4BQ9H329 900 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 EXO5Q9H790 373 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 WDR41Q9HAD4 459 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 GALNT9Q9HCQ5 603 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 AHSPQ9NZD4 102 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 EHD3Q9NZN3 535 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 TMEM216Q9P0N5 145 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 SLC12A4Q9UP95 1085 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 C15orf41Q9Y2V0 281 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 PLLPQ9Y342 182 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 ZNF407Q9C0G0 2248 aa6.41□□□□□ -1.38
HDAC3-207ENST00000475549 VPS13CQ709C8 3753 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 GTF3C1Q12789 2109 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 C1orf226A1L170 272 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 HSPB2A8KAH6 182 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 MANBAO00462 879 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 UBFD1O14562 309 aaKnown RBP6.4□□□□□ -1.38
HDAC3-207ENST00000475549 TP53I11O14683 189 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 GNB5O14775 395 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 SMIM24O75264 130 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 UGT2B11O75310 529 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 ERAL1O75616 437 aaKnown RBP6.4□□□□□ -1.38
HDAC3-207ENST00000475549 OR4F21O95013 312 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 OTCP00480 354 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 CT45A8P0DMV1 189 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 CT45A9P0DMV2 189 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 PCSK2P16519 638 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 NAGAP17050 411 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 CSNK2A2P19784 350 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-207ENST00000475549 DRD5P21918 477 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 TIMP3P35625 211 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 ARL1P40616 181 aaPredicted RBP6.4□□□□□ -1.38
HDAC3-207ENST00000475549 KIR2DL3P43628 341 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 SERPINB9P50453 376 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 ART1P52961 327 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 RIPPLY3P57055 190 aa6.4□□□□□ -1.38
HDAC3-207ENST00000475549 CLCQ05315 142 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms