RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 GPR135Q8IZ08 494 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CACTIN-AS1Q8N1I8 211 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HORMAD2Q8N7B1 307 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 AGBL5Q8NDL9 886 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 HIPK4Q8NE63 616 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PLPP5Q8NEB5 264 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 OR7G2Q8NG99 324 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 OR9A2Q8NGT5 310 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 NRG4Q8WWG1 115 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 N4BP2L2Q92802 583 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PYURFQ96I23 114 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 RSRC1Q96IZ7 334 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 RNF145Q96MT1 663 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ZNF578Q96N58 590 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CDC6Q99741 560 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PELOQ9BRX2 385 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 EDEM2Q9BV94 578 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 UGT2B28Q9BY64 529 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 SLC26A1Q9H2B4 701 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PIF1Q9H611 641 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 CXorf21Q9HAI6 301 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ZNF304Q9HCX3 659 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 PARD6AQ9NPB6 346 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 TMEM9BQ9NQ34 198 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 SLC22A11Q9NSA0 550 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 RXFP3Q9NSD7 469 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ZCCHC3Q9NUD5 404 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MAT2BQ9NZL9 334 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 FTSJ1Q9UET6 329 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ANAPC2Q9UJX6 822 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ACSL6Q9UKU0 697 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 ANGPTL2Q9UKU9 493 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 FAF1Q9UNN5 650 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 MRPS33Q9Y291 106 aaKnown RBP6.19□□□□□ -1.42
ATG4A-207ENST00000474825 OTOGLQ3ZCN5 2332 aa6.19□□□□□ -1.42
ATG4A-207ENST00000474825 SPTBN4Q9H254 2564 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 UNC13CQ8NB66 2214 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 COL27A1Q8IZC6 1860 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 TTC36A6NLP5 189 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 VSTM2BA6NLU5 285 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 DUXAA6NLW8 204 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 H0Y3Z8 333 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 TMX2-CTNND1H3BSU7 103 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 LDB3O75112 727 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 GMNNO75496 209 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 TIAF1O95411 115 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CBX7O95931 251 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 AGR2O95994 175 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ALBP02768 609 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 NTRK1P04629 796 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 HMGN2P05204 90 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 RAP2AP10114 183 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CDK4P11802 303 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 FCGR1AP12314 374 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ETS2P15036 469 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 MATN1P21941 496 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PSMA4P25789 261 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 GPC1P35052 558 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SOAT1P35610 550 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 MC3RP41968 323 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CRATP43155 626 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 XCR1P46094 333 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PTDSS1P48651 473 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ANXA11P50995 505 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CLCN2P51788 898 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 EFNA3P52797 238 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 LIMK1P53667 647 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SELENOWP63302 87 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 RHAGQ02094 409 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 FUT7Q11130 342 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SCARB2Q14108 478 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 LTB4RQ15722 352 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 NKG7Q16617 165 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SYT16Q17RD7 645 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SNAP47Q5SQN1 464 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 OGFRL1Q5TC84 451 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PRAMEF17Q5VTA0 474 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 HMBOX1Q6NT76 420 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PWWP2BQ6NUJ5 590 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 REEP3Q6NUK4 255 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CDC73Q6P1J9 531 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 TMEM107Q6UX40 140 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CEACAM20Q6UY09 585 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 DGAT2L6Q6ZPD8 337 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 TTLL10Q6ZVT0 673 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 B3GNT8Q7Z7M8 397 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PATL1Q86TB9 770 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PPP1R3BQ86XI6 285 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ZC3H7AQ8IWR0 971 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 OR4N5Q8IXE1 308 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 ANKFN1Q8N957 763 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SLC38A9Q8NBW4 561 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 CHDHQ8NE62 594 aaPredicted RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 OR5AK3PQ8NH89 298 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 PNPT1Q8TCS8 783 aaKnown RBP6.18□□□□□ -1.42
ATG4A-207ENST00000474825 SLC38A5Q8WUX1 472 aa6.18□□□□□ -1.42
ATG4A-207ENST00000474825 APOBEC4Q8WW27 367 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms