RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DCAF12Q5T6F0 453 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 STEAP1BQ6NZ63 245 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 WASH2PQ6VEQ5 465 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 C18orf65Q6ZTR6 163 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 CENPUQ71F23 418 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 RPAINQ86UA6 219 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 ITIH5Q86UX2 942 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 WDR49Q8IV35 697 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 GCNT2Q8N0V5 402 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 KRT222Q8N1A0 295 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 CENPSQ8N2Z9 138 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 STKLD1Q8NE28 680 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 BEST4Q8NFU0 473 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 IPMKQ8NFU5 416 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 HCAR2Q8TDS4 363 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 PCNPQ8WW12 178 aaKnown RBP3.63□□□□□ -1.83
BRCA1-212ENST00000473961 SLCO2A1Q92959 643 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 DTNBP1Q96EV8 351 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 ALKBH3Q96Q83 286 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-212ENST00000473961 ACCSQ96QU6 501 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 JPH2Q9BR39 696 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-212ENST00000473961 OVOL2Q9BRP0 275 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 CRACR2AQ9BSW2 395 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 NLNQ9BYT8 704 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 PLEKHA3Q9HB20 300 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 GDAP2Q9NXN4 497 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 C6orf203Q9P0P8 240 aaPredicted RBP3.63□□□□□ -1.83
BRCA1-212ENST00000473961 P2RX2Q9UBL9 471 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 EXTL2Q9UBQ6 330 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 BAIAP2L1Q9UHR4 511 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 CTNNA3Q9UI47 895 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 FOXJ3Q9UPW0 622 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 ANGPTL3Q9Y5C1 460 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 KIAA1210Q9ULL0 1709 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 KIF16BQ96L93 1317 aa3.63□□□□□ -1.83
BRCA1-212ENST00000473961 FMN1Q68DA7 1419 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 PTPRUQ92729 1446 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 A0A1B0GUL7 405 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 CLRN2A0PK11 232 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 SH3PXD2BA1X283 911 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TRIM49BA6NDI0 452 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 SRRM4A7MD48 611 aaKnown RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 A8MU76 341 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 A8MUI8 341 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 MAGEB3O15480 346 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ADAM12O43184 909 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TBX19O60806 448 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 STK17BO94768 372 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ZNF432O94892 652 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 CA3P07451 260 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 FHP07954 510 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 UQCRBP14927 111 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 PSMA2P25787 234 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 PDHA2P29803 388 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 OTX2P32243 289 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 OPRL1P41146 370 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TRA2BP62995 288 aaKnown RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 PMP22Q01453 160 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 MLF2Q15773 248 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TATDN3Q17R31 274 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ZNF528Q3MIS6 628 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 DCAF4L1Q3SXM0 396 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 AGAP7PQ5VUJ5 663 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 NIPAL3Q6P499 406 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TRIM65Q6PJ69 517 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 KDELC1Q6UW63 502 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TMEM110Q86TL2 294 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 NR2C2APQ86WQ0 139 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 FAM131BQ86XD5 332 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 METTL4Q8N3J2 472 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ADAD2Q8NCV1 583 aaKnown RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ZNF397Q8NF99 534 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 OR52B6Q8NGF0 335 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ZNF519Q8TB69 540 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 ATP8B4Q8TF62 1192 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 CCDC51Q96ER9 411 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 LGMNQ99538 433 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 TRIM6Q9C030 488 aaPredicted RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 STRADBQ9C0K7 418 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 EGLN1Q9GZT9 426 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 LPAR2Q9HBW0 351 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 SLC25A19Q9HC21 320 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 NDE1Q9NXR1 346 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 RSPH14Q9UHP6 348 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 XPO7Q9UIA9 1087 aaKnown RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 IKZF3Q9UKT9 509 aa3.62□□□□□ -1.83
BRCA1-212ENST00000473961 MRPS28Q9Y2Q9 187 aaKnown RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 MRPS18CQ9Y3D5 142 aaKnown RBP3.62□□□□□ -1.83
BRCA1-212ENST00000473961 NPIPB9F8W1W9 429 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 FBP2O00757 339 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 CYB561D2O14569 222 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 EI24O14681 340 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 APBB3O95704 486 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 CALCAP01258 141 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 CSF2P04141 144 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 ASNSP08243 561 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 ANXA4P09525 319 aaPredicted RBP3.61□□□□□ -1.83
BRCA1-212ENST00000473961 TRIM49P0CI25 452 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 TRIM49CP0CI26 452 aa3.61□□□□□ -1.83
BRCA1-212ENST00000473961 HNRNPA2B1P22626 353 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms