RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CLHC1Q8NHS4 586 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 KAT2AQ92830 837 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 SPACA9Q96E40 222 aaPredicted RBP17.47■□□□□ 0.39
PTCD3-210ENST00000473829 TSSK3Q96PN8 268 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 ITPAQ9BY32 194 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 SH2D2AQ9NP31 389 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 SEC14L3Q9UDX4 400 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 BCAP29Q9UHQ4 241 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 BAIAP2L1Q9UHR4 511 aa17.47■□□□□ 0.39
PTCD3-210ENST00000473829 MYO1GB0I1T2 1018 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 NPIPA5E9PKD4 350 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 PEX11AO75192 247 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 NME6O75414 186 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-210ENST00000473829 FBXO45P0C2W1 286 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF24P17028 368 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 NNATQ16517 81 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 ZNF385BQ569K4 471 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 FHL5Q5TD97 284 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 GFRALQ6UXV0 394 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 SAMD14Q8IZD0 417 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-210ENST00000473829 FAM9CQ8IZT9 166 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 ZFP62Q8NB50 900 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-210ENST00000473829 MGARPQ8TDB4 240 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 TP53INP1Q96A56 240 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 ARL8AQ96BM9 186 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 PAIP2Q9BPZ3 127 aaKnown RBP17.46■□□□□ 0.39
PTCD3-210ENST00000473829 NXF5Q9H1B4 397 aaKnown RBP17.46■□□□□ 0.39
PTCD3-210ENST00000473829 GIMAP4Q9NUV9 329 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 TAS2R7Q9NYW3 318 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 NPIPA1Q9UND3 350 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 OSGIN2Q9Y236 505 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 WBP11Q9Y2W2 641 aaKnown RBP17.46■□□□□ 0.39
PTCD3-210ENST00000473829 DOPEY2Q9Y3R5 2298 aa17.46■□□□□ 0.39
PTCD3-210ENST00000473829 ASH1LQ9NR48 2969 aaKnown RBP17.46■□□□□ 0.38
PTCD3-210ENST00000473829 KLRC4-KLRK1H3BQV0 150 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 AKAP10O43572 662 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 LRATO95237 230 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 BCKDHAP12694 445 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 SLC1A6P48664 564 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 EMDP50402 254 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 PDCD2Q16342 344 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-210ENST00000473829 HHATQ5VTY9 493 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 HLA-DQA1Q5Y7H0 255 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 PRR22Q8IZ63 422 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 OR2M7Q8NG81 312 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 OR7G2Q8NG99 324 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 OR10G3Q8NGC4 313 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 SGCZQ96LD1 299 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 GPR137Q96N19 417 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 BBS4Q96RK4 519 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 ERRFI1Q9UJM3 462 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-210ENST00000473829 TMED5Q9Y3A6 229 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 RAP2CQ9Y3L5 183 aa17.45■□□□□ 0.38
PTCD3-210ENST00000473829 CHCHD2Q9Y6H1 151 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-210ENST00000473829 ZNHIT1O43257 154 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 AGFG2O95081 481 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 H2AFXP16104 143 aaPredicted RBP17.44■□□□□ 0.38
PTCD3-210ENST00000473829 GRK2P25098 689 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 PIGAP37287 484 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 DNASE1L1P49184 302 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 NCBP2P52298 156 aaKnown RBP eCLIP17.44■□□□□ 0.38
PTCD3-210ENST00000473829 HSF1Q00613 529 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 BST1Q10588 318 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 C6orf136Q5SQH8 315 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 HOMEZQ8IX15 550 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 TAGAPQ8N103 731 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 POGLUT1Q8NBL1 392 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 FAM13CQ8NE31 585 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 C17orf47Q8NEP4 570 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 OR5M3Q8NGP4 307 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 PAQR8Q8TEZ7 354 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 PPP3R2Q96LZ3 170 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 AMDHD1Q96NU7 426 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 C1orf50Q9BV19 199 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 GLIPR2Q9H4G4 154 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 SACM1LQ9NTJ5 587 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 HAO1Q9UJM8 370 aa17.44■□□□□ 0.38
PTCD3-210ENST00000473829 NCKAP5O14513 1909 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 PTPN13Q12923 2485 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 HS6ST1O60243 411 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 CNR1P21554 472 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 MPIP34949 423 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 MC3RP41968 323 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 SLC18A1P54219 525 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 FBXW4P57775 412 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 STX3Q13277 289 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 PDE7AQ13946 482 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 NTRK2Q16620 822 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 ATP6AP1LQ52LC2 224 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 PRAMEF20Q5VT98 475 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 CHERPQ8IWX8 916 aaKnown RBP17.43■□□□□ 0.38
PTCD3-210ENST00000473829 LIX1Q8N485 282 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 CIDECQ96AQ7 238 aaPredicted RBP17.43■□□□□ 0.38
PTCD3-210ENST00000473829 PPP1R36Q96LQ0 422 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 REEP4Q9H6H4 257 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 PROK2Q9HC23 129 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 CNOT11Q9UKZ1 510 aaKnown RBP17.43■□□□□ 0.38
PTCD3-210ENST00000473829 NPFFR2Q9Y5X5 522 aa17.43■□□□□ 0.38
PTCD3-210ENST00000473829 FAM166BA8MTA8 275 aa17.42■□□□□ 0.38
PTCD3-210ENST00000473829 TFECO14948 347 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms