RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 FBXO8Q9NRD0 319 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 FAM120CQ9NX05 1096 aaKnown RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 SOHLH2Q9NX45 425 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SEMA5BQ9P283 1151 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 MAN2B2Q9Y2E5 1009 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 MAU2Q9Y6X3 613 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 NUP214P35658 2090 aaPredicted RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 SPTBN4Q9H254 2564 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 DHRS12A0PJE2 317 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 MAN1A2O60476 641 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SCN2BO60939 215 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 B3GALT4O96024 378 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 CKMT1AP12532 417 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 BMP2P12643 396 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 CD59P13987 128 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 MATN1P21941 496 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 CERS1P27544 350 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 RRM2P31350 389 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SNRPNP63162 240 aaKnown RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 BTN3A2P78410 334 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 PLIN5Q00G26 463 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SLAMF1Q13291 335 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 ZNF385BQ569K4 471 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 INTS11Q5TA45 600 aaKnown RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 MRM1Q6IN84 353 aaKnown RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 DNAJB8Q8NHS0 232 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 ZCCHC10Q8TBK6 192 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 PPCDCQ96CD2 204 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 ITCHQ96J02 903 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 CIB1Q99828 191 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 BHLHE41Q9C0J9 482 aaPredicted RBP13.95□□□□□ -0.18
LMNA-213ENST00000473598 ROGDIQ9GZN7 287 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SEMA6AQ9H2E6 1030 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 MIEF1Q9NQG6 463 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 NPAP1Q9NZP6 1156 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SH3BP4Q9P0V3 963 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 SNX13Q9Y5W8 968 aa13.95□□□□□ -0.18
LMNA-213ENST00000473598 CASC3O15234 703 aaKnown RBP13.94□□□□□ -0.18
LMNA-213ENST00000473598 GSNP06396 782 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 DDCP20711 480 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 HTR1EP28566 365 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 CDK10Q15131 360 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 MTX3Q5HYI7 312 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
LMNA-213ENST00000473598 HMBOX1Q6NT76 420 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 ZNF773Q6PK81 442 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 DBX2Q6ZNG2 339 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 PRSS42Q7Z5A4 293 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 ANKRD46Q86W74 232 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 IFNEQ86WN2 208 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 MMP21Q8N119 569 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 MFSD4AQ8N468 514 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 NUDT22Q9BRQ3 303 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 ADI1Q9BV57 179 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 ZNF304Q9HCX3 659 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 STARD5Q9NSY2 213 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 TEX10Q9NXF1 929 aaPredicted RBP13.94□□□□□ -0.18
LMNA-213ENST00000473598 PLCL2Q9UPR0 1127 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 NEUROG3Q9Y4Z2 214 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 ASB4Q9Y574 426 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 PCDHGB2Q9Y5G2 931 aa13.94□□□□□ -0.18
LMNA-213ENST00000473598 COL5A1P20908 1838 aaPredicted RBP13.94□□□□□ -0.18
LMNA-213ENST00000473598 SHOXO15266 292 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 TBX19O60806 448 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 CTSBP07858 339 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 ALOX12P18054 663 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 DAB2P98082 770 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 GALK2Q01415 458 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 SLC36A3Q495N2 470 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 LRIF1Q5T3J3 769 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 ANXA8L1Q5VT79 327 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 UBE2UQ5VVX9 321 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 RSBN1Q5VWQ0 802 aaPredicted RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 TMEM71Q6P5X7 295 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 ERMP1Q7Z2K6 904 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 FAM110BQ8TC76 370 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 ZNF285Q96NJ3 590 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 SERINC2Q96SA4 455 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 LYARQ9NX58 379 aaKnown RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 MRPS2Q9Y399 296 aaKnown RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 SLC22A7Q9Y694 548 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 A0A096LPI6 279 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 TEX51A0A1B0GUA7 166 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 A0A1W2PQM1 296 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 RNASET2O00584 256 aaKnown RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 ERN1O75460 977 aaKnown RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 TIPRLO75663 272 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 GPIP06744 558 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 DRD2P14416 443 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 ZNF10P21506 573 aaPredicted RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 PSMA4P25789 261 aaKnown RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 DUSP3P51452 185 aaPredicted RBP13.93□□□□□ -0.18
LMNA-213ENST00000473598 HSD11B2P80365 405 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 MERTKQ12866 999 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 NEDD8Q15843 81 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 PRSS53Q2L4Q9 553 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 PRTGQ2VWP7 1150 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 DEFB134Q4QY38 66 aa13.93□□□□□ -0.18
LMNA-213ENST00000473598 SNAP47Q5SQN1 464 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms