RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 OR2AG2A6NM03 316 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 A8MV72 311 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 HEPACAM2A8MVW5 462 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 M0R129 80 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 PLA2G10O15496 165 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 RGS9O75916 674 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 UBXN7O94888 489 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 SOX14O95416 240 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 TGFB1P01137 390 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ANXA3P12429 323 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 NPPBP16860 134 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 DDX6P26196 483 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC4-209ENST00000473533 RNF144AP50876 292 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 LIM2P55344 173 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 SHC2P98077 582 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ST3GAL3Q11203 375 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 TMEM115Q12893 351 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 TSPAN31Q12999 210 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 RPA4Q13156 261 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ZMAT1Q5H9K5 638 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 CD276Q5ZPR3 534 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 SERPINA13PQ6UXR4 307 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ARMCX6Q7L4S7 300 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 PDZD3Q86UT5 571 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 C17orf64Q86WR6 236 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 MARCH9Q86YJ5 346 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 TRIM48Q8IWZ4 208 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 RNF175Q8N4F7 328 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 OR5AK3PQ8NH89 298 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 NEIL3Q8TAT5 605 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 WFDC5Q8TCV5 224 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ZNF480Q8WV37 535 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 RFT1Q96AA3 541 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 FYTTD1Q96QD9 318 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 RIOK2Q9BVS4 552 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 RHBGQ9H310 441 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 SRRDQ9UH36 339 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ACSL6Q9UKU0 697 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 NDRG2Q9UN36 371 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 EXO1Q9UQ84 846 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 HSPB11Q9Y547 144 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 INSL5Q9Y5Q6 135 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 PRAMEF25A6NGN4 478 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 AP3D1O14617 1153 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 PLD2O14939 933 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 BNIP3LO60238 219 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ZNF821O75541 412 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 AGR2O95994 175 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 MSL3P1P0C860 447 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 PAICSP22234 425 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 GKP32189 559 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ATP6V1E1P36543 226 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 FRKP42685 505 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 CCT3P49368 545 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 VASPP50552 380 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 ARFIP1P53367 373 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 CDH11P55287 796 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 TSTA3Q13630 321 aaPredicted RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 PUM1Q14671 1186 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC4-209ENST00000473533 ZNF311Q5JNZ3 666 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ZNF697Q5TEC3 545 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 KHDRBS2Q5VWX1 349 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 PYHIN1Q6K0P9 492 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 PODNL1Q6PEZ8 512 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 TMEM220Q6QAJ8 160 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 GPALPP1Q8IXQ4 340 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 CADM2Q8N3J6 435 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 HORMAD2Q8N7B1 307 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 SPERTQ8NA61 448 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 POGLUT1Q8NBL1 392 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 ANKK1Q8NFD2 765 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 OR56A1Q8NGH5 318 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 RGMAQ96B86 450 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 MRPL48Q96GC5 212 aaKnown RBP5.79□□□□□ -1.48
HERC4-209ENST00000473533 IGSF21Q96ID5 467 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 KCNJ15Q99712 375 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 FUZQ9BT04 418 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 OR51B5Q9H339 312 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 SERHL2Q9H4I8 314 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 CXorf36Q9H7Y0 433 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 EVA1AQ9H8M9 152 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 STARD7Q9NQZ5 370 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 TAAR2Q9P1P5 351 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 RHCGQ9UBD6 479 aa5.79□□□□□ -1.48
HERC4-209ENST00000473533 LINC00862A6NCI5 91 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 WASHC1A8K0Z3 465 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 C12orf71A8MTZ7 269 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 ANHXE9PGG2 379 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 GREM1O60565 184 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 SOD1P00441 154 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 CSF2P04141 144 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 SLC10A3P09131 477 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 ELFN1P0C7U0 828 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 PRKAR2AP13861 404 aaKnown RBP5.78□□□□□ -1.48
HERC4-209ENST00000473533 CD70P32970 193 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 ETV5P41161 510 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 SLC1A3P43003 542 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 MAN2A2P49641 1150 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 FLT3LGP49771 235 aa5.78□□□□□ -1.48
HERC4-209ENST00000473533 ETV1P50549 477 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms