RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ZBTB44Q8NCP5 570 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 OR1K1Q8NGR3 316 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 NCLNQ969V3 563 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 PNPLA2Q96AD5 504 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 LINC00479Q96M42 142 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 NDUFAF3Q9BU61 184 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 MCRIP2Q9BUT9 160 aaKnown RBP3.38□□□□□ -1.87
PRPF3-204ENST00000470824 RAB11FIP5Q9BXF6 653 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 DPH5Q9H2P9 285 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ECT2Q9H8V3 914 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 SP140LQ9H930 580 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 LIN28AQ9H9Z2 209 aaKnown RBP3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ROPN1Q9HAT0 212 aaPredicted RBP3.38□□□□□ -1.87
PRPF3-204ENST00000470824 DEPPQ9NTK1 212 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ANKMY1Q9P2S6 941 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 MIOXQ9UGB7 285 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ZNF175Q9Y473 711 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ATG4BQ9Y4P1 393 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 IQGAP1P46940 1657 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 ATP7AQ04656 1500 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 AFF2P51816 1311 aa3.38□□□□□ -1.87
PRPF3-204ENST00000470824 XIRP1Q702N8 1843 aaKnown RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ALKQ9UM73 1620 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 NCAPD2Q15021 1401 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 CNTLNQ9NXG0 1405 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 TRAPPC8Q9Y2L5 1435 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 PLA2R1Q13018 1463 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 TCOF1Q13428 1488 aaKnown RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 MLH3Q9UHC1 1453 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 TRBV5-4A0A0C4DH59 114 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 BCLAF3A2AJT9 711 aaKnown RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ASB14A6NK59 587 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ZNF724A8MTY0 619 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ARHGEF33A8MVX0 844 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 K7EPI3 171 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 LGALS8O00214 317 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ADAM12O43184 909 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 NOL3O60936 208 aaKnown RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 DUSP11O75319 330 aaKnown RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 SCGB2A1O75556 95 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ZCCHC18P0CG32 403 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 PRDX2P32119 198 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 HILS1P60008 231 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 IRX1P78414 480 aaPredicted RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 PRKCEQ02156 737 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 NFATC2Q13469 925 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ITPK1Q13572 414 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 EMC2Q15006 297 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ZNF528Q3MIS6 628 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 DPY19L2P2Q6ZN68 376 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 Q6ZTC4 211 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 GOLGA7Q7Z5G4 137 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 VPS36Q86VN1 386 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 AMZ2Q86W34 360 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 GPBP1Q86WP2 473 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 CARM1Q86X55 608 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 CHDHQ8NE62 594 aaPredicted RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 OR1B1Q8NGR6 318 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 CHPT1Q8WUD6 406 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 PRICKLE1Q96MT3 831 aaPredicted RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 AGAP3Q96P47 875 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 TRIM51Q9BSJ1 452 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 SYT11Q9BT88 431 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 NLNQ9BYT8 704 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 NT5DC2Q9H857 520 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 MOB1AQ9H8S9 216 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 VAT1LQ9HCJ6 419 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 NUDT4Q9NZJ9 180 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 EIF3KQ9UBQ5 218 aaKnown RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ASIC3Q9UHC3 531 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ZNF490Q9ULM2 529 aaPredicted RBP3.37□□□□□ -1.87
PRPF3-204ENST00000470824 MGAT4BQ9UQ53 548 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 SLC9A8Q9Y2E8 581 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 KLHDC2Q9Y2U9 406 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 CPS1P31327 1500 aa3.37□□□□□ -1.87
PRPF3-204ENST00000470824 ZC3H13Q5T200 1668 aaKnown RBP3.36□□□□□ -1.87
PRPF3-204ENST00000470824 CLIP1P30622 1438 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 TROQ12816 1431 aaPredicted RBP3.36□□□□□ -1.87
PRPF3-204ENST00000470824 CEP152O94986 1710 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 TRGV8A0A0C4DH27 118 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 F8WDY8 70 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 PDHXO00330 501 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 SOCS3O14543 225 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 NDC80O14777 642 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 SNAP91O60641 907 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 SMPD2O60906 423 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 GUCA1CO95843 209 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 HEXBP07686 556 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 RRASP10301 218 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 MAT2AP31153 395 aaKnown RBP3.36□□□□□ -1.87
PRPF3-204ENST00000470824 CAPGP40121 348 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 RIDAP52758 137 aaKnown RBP3.36□□□□□ -1.87
PRPF3-204ENST00000470824 PDZK1IP1Q13113 114 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 ZSWIM7Q19AV6 140 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 C2CD6Q53TS8 623 aa3.36□□□□□ -1.87
PRPF3-204ENST00000470824 TCHHL1Q5QJ38 904 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms