RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 UBQLN3Q9H347 655 aa12.68□□□□□ -0.38
SEMA3F-208ENST00000470737 CALHM2Q9HA72 323 aa12.68□□□□□ -0.38
SEMA3F-208ENST00000470737 TSC22D4Q9Y3Q8 395 aa12.68□□□□□ -0.38
SEMA3F-208ENST00000470737 ASB4Q9Y574 426 aa12.68□□□□□ -0.38
SEMA3F-208ENST00000470737 KIAA1549Q9HCM3 1950 aa12.68□□□□□ -0.38
SEMA3F-208ENST00000470737 A0A0A6YYD5 115 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 A0A1W2PR48 441 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CASKO14936 926 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 TMPRSS11DO60235 418 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 ACTL6AO96019 429 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 GFAPP14136 432 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CRABP2P29373 138 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 PHBP35232 272 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 BSGP35613 385 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 ARL1P40616 181 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CASP3P42574 277 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CUL3Q13618 768 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 PCBP2Q15366 365 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 KBTBD12Q3ZCT8 623 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 EIPR1Q53HC9 387 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 WIPI1Q5MNZ9 446 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CMC1Q7Z7K0 106 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 IFT20Q8IY31 132 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 PRR22Q8IZ63 422 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 PPM1NQ8N819 430 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 WDYHV1Q96HA8 205 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 RBM24Q9BX46 236 aaKnown RBP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 OR10A5Q9H207 317 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 PLEKHF2Q9H8W4 249 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CXorf21Q9HAI6 301 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 BEX4Q9NWD9 120 aaPredicted RBP12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 CFL2Q9Y281 166 aa12.67□□□□□ -0.38
SEMA3F-208ENST00000470737 WASHC1A8K0Z3 465 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 H0Y3Z8 333 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 H0YIV9 168 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ARHGEF9O43307 516 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 UGDHO60701 494 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 CLPSP04118 112 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 INHBBP09529 407 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 NT5EP21589 574 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 GMPRP36959 345 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 PIK3CGP48736 1102 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 FUT7Q11130 342 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 POU4F3Q15319 338 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 CPSF6Q16630 551 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 FNDC7Q5VTL7 733 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 SHEQ5VZ18 495 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 TIGD3Q6B0B8 471 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ENPP6Q6UWR7 440 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ANGPTL8Q6UXH0 198 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 CLEC9AQ6UXN8 241 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 YRDCQ86U90 279 aaKnown RBP12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 FAM83FQ8NEG4 500 aaPredicted RBP12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 C17orf47Q8NEP4 570 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 OR7G1Q8NGA0 311 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 OR4K14Q8NGD5 310 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ZPLD1Q8TCW7 415 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 DTNBP1Q96EV8 351 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ZFP3Q96NJ6 502 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 TM9SF2Q99805 663 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 SFXN3Q9BWM7 321 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ZNF717Q9BY31 904 aaPredicted RBP12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ACBD3Q9H3P7 528 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 JKAMPQ9P055 326 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 EIF3LQ9Y262 564 aaKnown RBP12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 ACOT9Q9Y305 439 aa12.66□□□□□ -0.38
SEMA3F-208ENST00000470737 CCDC189A1A4V9 331 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 GBAP04062 536 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 ABCD3P28288 659 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 PTPN6P29350 595 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 HOXC12P31275 282 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 XKP51811 444 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 NAGLUP54802 743 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 DIO3P55073 304 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 NKX6-1P78426 367 aaPredicted RBP12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 DLG1Q12959 904 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 GTF2H2Q13888 395 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 PFKFB4Q16877 469 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 DCST1Q5T197 706 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 SLC30A6Q6NXT4 461 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 GTF2H2CQ6P1K8 395 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 PAGE2Q7Z2X7 111 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 LUZP2Q86TE4 346 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 C9orf106Q8NAJ2 232 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 RHEBL1Q8TAI7 183 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 IFT81Q8WYA0 676 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 ATP6V1E2Q96A05 226 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 ISL2Q96A47 359 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 ADIPOR1Q96A54 375 aa12.65□□□□□ -0.38
SEMA3F-208ENST00000470737 NXNL1Q96CM4 212 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms