RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 DIO2Q92813 273 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 L3HYPDHQ96EM0 354 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 ZNF681Q96N22 645 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 RILPQ96NA2 401 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 ANGPTL4Q9BY76 406 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 NXF5Q9H1B4 397 aaKnown RBP14.95□□□□□ -0.02
COL9A3-208ENST00000469802 KCNJ16Q9NPI9 418 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 NMRK1Q9NWW6 199 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 B4GALT7Q9UBV7 327 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 Q9UFV3 132 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 ACAD8Q9UKU7 415 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 DOCK7Q96N67 2140 aa14.95□□□□□ -0.02
COL9A3-208ENST00000469802 F8P00451 2351 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 SUPT7LO94864 414 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 CBX7O95931 251 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 KRT6AP02538 564 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 KRT6BP04259 564 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 HOXD4P09016 255 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 FAM153BP0C7A2 387 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 GABRA1P14867 456 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 CSNK2A2P19784 350 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 ATP5F1P24539 256 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 ABCD3P28288 659 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 KRT6CP48668 564 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 PRKAA2P54646 552 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 NRG3P56975 720 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 TLE4Q04727 773 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 FAM153CQ494X1 144 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 TEX35Q5T0J7 233 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 C6orf163Q5TEZ5 329 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 TMEM81Q6P7N7 255 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 FAM111BQ6SJ93 734 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 GPRIN3Q6ZVF9 776 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 DMRTC2Q8IXT2 367 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 SIMC1Q8NDZ2 872 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 ACMSDQ8TDX5 336 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 CHTF18Q8WVB6 975 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 KLHL29Q96CT2 875 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 C11orf24Q96F05 449 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 CNRIP1Q96F85 164 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 ACPTQ9BZG2 426 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 MCCC2Q9HCC0 563 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 PSMC3IPQ9P2W1 217 aaPredicted RBP14.94□□□□□ -0.02
COL9A3-208ENST00000469802 HEY2Q9UBP5 337 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 VPS29Q9UBQ0 182 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 MCM8Q9UJA3 840 aa14.94□□□□□ -0.02
COL9A3-208ENST00000469802 ERAL1O75616 437 aaKnown RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 PPM1BO75688 479 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 SNX4O95219 450 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 HPNP05981 417 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 ABCB1P08183 1280 aaPredicted RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 GSTA1P08263 222 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 CHN1P15882 459 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 NAGAP17050 411 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 IMPDH1P20839 514 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 GDF1P27539 372 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 FEN1P39748 380 aaKnown RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 CASP3P42574 277 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 ZFP36L2P47974 494 aaKnown RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 HTR6P50406 440 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 RAE1P78406 368 aaKnown RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 CRYZQ08257 329 aaKnown RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 LCP2Q13094 533 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 SLC29A2Q14542 456 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 EXOSC7Q15024 291 aaKnown RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 TMEM198Q66K66 360 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 SEM1Q6ZVN7 128 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 SLC22A9Q8IVM8 553 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 ULK2Q8IYT8 1036 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 PRR22Q8IZ63 422 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 CNPY4Q8N129 248 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 ZNF675Q8TD23 568 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 TMEM41AQ96HV5 264 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 JSRP1Q96MG2 331 aaPredicted RBP14.93□□□□□ -0.02
COL9A3-208ENST00000469802 FAIM2Q9BWQ8 316 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 ITPAQ9BY32 194 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 BRINP2Q9C0B6 783 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 EXO5Q9H790 373 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 EMCNQ9ULC0 261 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 CFL2Q9Y281 166 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 STK38LQ9Y2H1 464 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 C15orf41Q9Y2V0 281 aa14.93□□□□□ -0.02
COL9A3-208ENST00000469802 ANKHD1Q8IWZ3 2542 aaKnown RBP14.92□□□□□ -0.02
COL9A3-208ENST00000469802 FOXO6A8MYZ6 492 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 GOLGA8RI6L899 631 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 ACOX3O15254 700 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 ENO1P06733 434 aaKnown RBP14.92□□□□□ -0.02
COL9A3-208ENST00000469802 CAPN3P20807 821 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 DEKP35659 375 aaKnown RBP14.92□□□□□ -0.02
COL9A3-208ENST00000469802 TRPC1P48995 793 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 EMDP50402 254 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 CDK9P50750 372 aaKnown RBP14.92□□□□□ -0.02
COL9A3-208ENST00000469802 PKNOX1P55347 436 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 LTB4RQ15722 352 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 NNATQ16517 81 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 RIPPLY2Q5TAB7 128 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 GALNT18Q6P9A2 607 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 LIX1LQ8IVB5 337 aa14.92□□□□□ -0.02
COL9A3-208ENST00000469802 GBP7Q8N8V2 638 aaPredicted RBP14.92□□□□□ -0.02
COL9A3-208ENST00000469802 ADCY4Q8NFM4 1077 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms