RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 FEN1P39748 380 aaKnown RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 CSRP3P50461 194 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 CLCA4Q14CN2 919 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 SMN1Q16637 294 aaKnown RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 XKR7Q5GH72 579 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 RPS26P11Q5JNZ5 115 aaPredicted RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 PDSS1Q5T2R2 415 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 TTC23Q5W5X9 447 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 OR4N5Q8IXE1 308 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 KLHDC8BQ8IXV7 354 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 IPCEF1Q8WWN9 437 aaPredicted RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 DNAJA3Q96EY1 480 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 OR4K3Q96R72 315 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 RBCK1Q9BYM8 510 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 EXOSC4Q9NPD3 245 aaKnown RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 ACTR10Q9NZ32 417 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 COL6A3P12111 3177 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 A0A0G2JPF8 293 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 AQP12BA6NM10 295 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 GABRR3A8MPY1 467 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 HNRNPCL3B7ZW38 293 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 FAM227AF5H4B4 570 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 H3BN98 237 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 MATN4O95460 622 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 HNRNPCL4P0DMR1 293 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 ZNF30P17039 623 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 GJA4P35212 333 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 TFF2Q03403 129 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 RUNX3Q13761 415 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 CTU2Q2VPK5 515 aaKnown RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 AQP12AQ8IXF9 295 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 OR6C4Q8NGE1 309 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 OR52N1Q8NH53 320 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 CSGALNACT1Q8TDX6 532 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 RLN3Q8WXF3 142 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 FGF14Q92915 247 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 NPAS1Q99742 590 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 USE1Q9NZ43 259 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 OSGIN1Q9UJX0 560 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 PCDHGA2Q9Y5H1 932 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 SNX11Q9Y5W9 270 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 APOL3O95236 402 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 SOX14O95416 240 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 ASGR2P07307 311 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 RAP2AP10114 183 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 ARSFP54793 590 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 ZNF750Q32MQ0 723 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 HSD17B12Q53GQ0 312 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 PRAMEF13Q5VWM6 474 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 SLC37A3Q8NCC5 494 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 KLHL15Q96M94 604 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 BBS4Q96RK4 519 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 SLC35A5Q9BS91 424 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 PLA2G2FQ9BZM2 168 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
USP11-206ENST00000469080 REEP1Q9H902 201 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 ACSL5Q9ULC5 683 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 PEX16Q9Y5Y5 336 aa11.7□□□□□ -0.54
USP11-206ENST00000469080 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 LILRB3O75022 631 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 ERN1O75460 977 aaKnown RBP11.69□□□□□ -0.54
USP11-206ENST00000469080 WISP3O95389 354 aaPredicted RBP11.69□□□□□ -0.54
USP11-206ENST00000469080 VIPP01282 170 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 C1QBP02746 253 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 GPIP06744 558 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 P2RY2P41231 377 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 RAB25P57735 213 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 ELAVL3Q14576 367 aaKnown RBP11.69□□□□□ -0.54
USP11-206ENST00000469080 GRK1Q15835 563 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 TMIGD1Q6UXZ0 262 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 BEND4Q6ZU67 534 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 AHSA2Q719I0 299 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 COMMD6Q7Z4G1 85 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 PARGQ86W56 976 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 HSH2DQ96JZ2 352 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 MNTQ99583 582 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 WDR26Q9H7D7 661 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 KCNK12Q9HB15 430 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 MALT1Q9UDY8 824 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 ACAD8Q9UKU7 415 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 SESN1Q9Y6P5 492 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 CACNA1GO43497 2377 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 TEX46H3BTG2 121 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 APODP05090 189 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 TRAPPC2P0DI81 140 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 TRAPPC2BP0DI82 140 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 RD3LP0DJH9 198 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 C7P10643 843 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 IGFBP5P24593 272 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 ACTR1BP42025 376 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 AP1S2P56377 157 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 EEFSECP57772 596 aaKnown RBP11.69□□□□□ -0.54
USP11-206ENST00000469080 ACTR1AP61163 376 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 IRF3Q14653 427 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 COX20Q5RI15 118 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 HES5Q5TA89 166 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
USP11-206ENST00000469080 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms