RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 OR5F1O95221 314 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ANKRD34CP0C6C1 535 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 POU2F1P14859 743 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 PCGF2P35227 344 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 RAB38P57729 211 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 FOLH1Q04609 750 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 VEZF1Q14119 521 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF628Q5EBL2 1059 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM64Q6YI46 380 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 C6orf120Q7Z4R8 191 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 EPHX4Q8IUS5 362 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF655Q8N720 491 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-208ENST00000468300 OR7G2Q8NG99 324 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 OR10Q1Q8NGQ4 319 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 ELP4Q96EB1 424 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 NEUROD4Q9HD90 331 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 LRRC42Q9Y546 428 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 SNX8Q9Y5X2 465 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 UNC13CQ8NB66 2214 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 TTC28Q96AY4 2481 aa7.75□□□□□ -1.17
BRCA1-208ENST00000468300 CPED1A4D0V7 1026 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 OR2W5A6NFC9 320 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 A8MU76 341 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 EVPLLA8MZ36 301 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 GUCY1B2O75343 617 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 PRSS23O95084 383 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 NSA2O95478 260 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SERPINA1P01009 418 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 RPLP0P05388 317 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 GPIP06744 558 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TFPTP0C1Z6 253 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 PPIBP23284 216 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CCT3P49368 545 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 MRPS15P82914 257 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 DUSP8Q13202 625 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SFT2D3Q587I9 215 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SNAP47Q5SQN1 464 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 OR52E8Q6IFG1 317 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 LIN54Q6MZP7 749 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 FAM111BQ6SJ93 734 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM107Q6UX40 140 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ERMP1Q7Z2K6 904 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 MAMDC2Q7Z304 686 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SPARTQ8N0X7 666 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SUMF1Q8NBK3 374 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 OR4D9Q8NGE8 314 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 IFI44Q8TCB0 444 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 LRGUKQ96M69 825 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 NSMCE2Q96MF7 247 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 LRRN3Q9H3W5 708 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 MS4A12Q9NXJ0 267 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 STOML1Q9UBI4 398 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 GMEB2Q9UKD1 530 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ANGPTL2Q9UKU9 493 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CFL2Q9Y281 166 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 KCNE3Q9Y6H6 103 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM150CB9EJG8 249 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 PDLIM1O00151 329 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ACOX3O15254 700 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TOX3O15405 576 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 PRKD3O94806 890 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 MT-ND1P03886 318 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ATP1B1P05026 303 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CT62P0C5K7 136 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 UMPSP11172 480 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 KDELR2P33947 212 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 MC3RP41968 323 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CRATP43155 626 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 IGLV3-21P80748 117 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ID2Q02363 134 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 FADDQ13158 208 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 AASDHQ4L235 1098 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 C6orf183Q5T699 404 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 GARNL3Q5VVW2 1013 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TUBA3EQ6PEY2 450 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 MED25Q71SY5 747 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 KMT5CQ86Y97 462 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TMEM126BQ8IUX1 230 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SLITRK4Q8IW52 837 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 RCBTB1Q8NDN9 531 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ADCY4Q8NFM4 1077 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CTHRC1Q96CG8 243 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 GTPBP2Q9BX10 602 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TGIF2Q9GZN2 237 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SEMA6AQ9H2E6 1030 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SOHLH2Q9NX45 425 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 SIDT1Q9NXL6 827 aaKnown RBP7.74□□□□□ -1.17
BRCA1-208ENST00000468300 HCN3Q9P1Z3 774 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 BCAP29Q9UHQ4 241 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CORO2BQ9UQ03 480 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 PCDHGA5Q9Y5G8 931 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 V9GYQ6 96 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 FAM149AA5PLN7 773 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TXNDC9O14530 226 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF749O43361 778 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 TIAF1O95411 115 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ZNF883P0CG24 379 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 ARAFP10398 606 aa7.74□□□□□ -1.17
BRCA1-208ENST00000468300 CPMP14384 443 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms