RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 APOOLQ6UXV4 268 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 RAPH1Q70E73 1250 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 ZNF410Q86VK4 478 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 SLC22A16Q86VW1 577 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-205ENST00000464541 SERPINA12Q8IW75 414 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 OR8H1Q8NGG4 311 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 MGARPQ8TDB4 240 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 VN1R17PQ8TDU5 208 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 HIST1H2ACQ93077 130 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 SIGLEC12Q96PQ1 595 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 CPXM1Q96SM3 734 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 FAM173AQ9BQD7 235 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 PIGVQ9NUD9 493 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 EPS15L1Q9UBC2 864 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 B4GALT7Q9UBV7 327 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 GPRASP1Q5JY77 1395 aa4.38□□□□□ -1.71
PTCD3-205ENST00000464541 ATP6V1G1O75348 118 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 GOSR1O95249 250 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 UGT1A6P19224 532 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 ACP1P24666 158 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 RPS4XP62701 263 aaKnown RBP4.37□□□□□ -1.71
PTCD3-205ENST00000464541 UBXN1Q04323 297 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 HKDC1Q2TB90 917 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 GPAT3Q53EU6 434 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 LUZP1Q86V48 1076 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 NAXDQ8IW45 347 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 COLGALT1Q8NBJ5 622 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 GTSF1Q8WW33 167 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 JPH2Q9BR39 696 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-205ENST00000464541 SLC9A8Q9Y2E8 581 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 KIF7Q2M1P5 1343 aa4.37□□□□□ -1.71
PTCD3-205ENST00000464541 C19orf81C9J6K1 198 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 NME2P1O60361 137 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 IGHV3-9P01782 118 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 AREGP15514 252 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 KLK2P20151 261 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 AZU1P20160 251 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 MEOX2P50222 304 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 DNAJC21Q5F1R6 531 aaKnown RBP4.36□□□□□ -1.71
PTCD3-205ENST00000464541 CGB2Q6NT52 195 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 CWC27Q6UX04 472 aaKnown RBP4.36□□□□□ -1.71
PTCD3-205ENST00000464541 CATSPER4Q7RTX7 472 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 RELL2Q8NC24 303 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-205ENST00000464541 PAXXQ9BUH6 204 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 PRMT8Q9NR22 394 aaPredicted RBP4.36□□□□□ -1.71
PTCD3-205ENST00000464541 KNSTRNQ9Y448 316 aa4.36□□□□□ -1.71
PTCD3-205ENST00000464541 TRABD2BA6NFA1 517 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 GJB5O95377 273 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 TPM2P07951 284 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 DESP17661 470 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 IGLV3-21P80748 117 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-205ENST00000464541 NPRL3Q12980 569 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 CD226Q15762 336 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 GCNT7Q6ZNI0 430 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 ZNF525Q8N782 197 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 ST7LQ8TDW4 575 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 P3H4Q92791 437 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 C9orf85Q96MD7 179 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 CCDC43Q96MW1 224 aaKnown RBP4.35□□□□□ -1.71
PTCD3-205ENST00000464541 NAP1L3Q99457 506 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-205ENST00000464541 KCNMB3Q9NPA1 279 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 MID1IP1Q9NPA3 183 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 TIGARQ9NQ88 270 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 HMG20BQ9P0W2 317 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 ENTPD4Q9Y227 616 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 SYNJ2O15056 1496 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 ATRXP46100 2492 aa4.35□□□□□ -1.71
PTCD3-205ENST00000464541 CCT8L1PA6NM43 557 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 K7ERI5 159 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 SAP18O00422 153 aaKnown RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 TSC22D2O75157 780 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 PNPP00491 289 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 GIG44P09565 113 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 PVRP15151 417 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 PGAM2P15259 253 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 IGFBP5P24593 272 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 FASP25445 335 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 MAT2AP31153 395 aaKnown RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 SLC25A1P53007 311 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 VCPP55072 806 aaKnown RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 BPIFB3P59826 476 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 SSTP61278 116 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 LYZP61626 148 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 PAX2Q02962 417 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 ATRAIDQ6UW56 229 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 C2orf66Q6UXQ4 117 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 TOM1L2Q6ZVM7 507 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 RANBP3LQ86VV4 465 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 TFB1MQ8WVM0 346 aaKnown RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 PIWIL1Q96J94 861 aaKnown RBP4.34□□□□□ -1.71
PTCD3-205ENST00000464541 ACCSQ96QU6 501 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 CCT8L2Q96SF2 557 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 NRN1Q9NPD7 142 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 CENPMQ9NSP4 180 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 PTPRUQ92729 1446 aa4.34□□□□□ -1.71
PTCD3-205ENST00000464541 EI24O14681 340 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 KINO60870 393 aaKnown RBP4.33□□□□□ -1.72
PTCD3-205ENST00000464541 B3GALNT1O75752 331 aa4.33□□□□□ -1.72
PTCD3-205ENST00000464541 PDE5AO76074 875 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms