RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SIMC1Q8NDZ2 872 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 OR7A2PQ8NGA2 310 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 OR52R1Q8NGF1 315 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 SLC22A8Q8TCC7 542 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 CPT1CQ8TCG5 803 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 ADIPOR1Q96A54 375 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 TP53INP1Q96A56 240 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 SNRNP40Q96DI7 357 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 C5orf34Q96MH7 638 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 KLHL1Q9NR64 748 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 HPF1Q9NWY4 346 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 PRODH2Q9UF12 536 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 MAPRE3Q9UPY8 281 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 ERVK-11Q9UQG0 969 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 PCDHGB6Q9Y5F9 930 aa13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 COPG1Q9Y678 874 aaKnown RBP13.43□□□□□ -0.26
SQSTM1-205ENST00000464493 PLOD2O00469 737 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ZNF354AO60765 605 aaPredicted RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 SLC25A12O75746 678 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 OR6B1O95007 311 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 SP1P08047 785 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 LAMP1P11279 417 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 FRKP42685 505 aaPredicted RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 EMDP50402 254 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 NR0B1P51843 470 aaKnown RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 MANFP55145 182 aaKnown RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 C21orf58P58505 322 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 MAPKAPK3Q16644 382 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 NXNQ6DKJ4 435 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 SLC25A25Q6KCM7 469 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 TMEM107Q6UX40 140 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 RGS9BPQ6ZS82 235 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ZNF551Q7Z340 670 aaPredicted RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 MAVSQ7Z434 540 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 SPATA19Q7Z5L4 167 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 TAGAPQ8N103 731 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 CYP4Z2PQ8N1L4 340 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 TMEM178AQ8NBL3 297 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 OR7G2Q8NG99 324 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ZFP28Q8NHY6 868 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 NUDT8Q8WV74 236 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 TMEM125Q96AQ2 219 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 COQ8BQ96D53 544 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ELP4Q96EB1 424 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ZBED6CLQ96FA7 236 aaPredicted RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 SCMH1Q96GD3 660 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 MAELQ96JY0 434 aaKnown RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 HES7Q9BYE0 225 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ANKRA2Q9H9E1 313 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ACSS1Q9NUB1 689 aaPredicted RBP13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 ATAD3AQ9NVI7 634 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 MAP10Q9P2G4 905 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 USH1CQ9Y6N9 552 aa13.42□□□□□ -0.26
SQSTM1-205ENST00000464493 A0A087WV62 115 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 TGDSO95455 350 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 NADKO95544 446 aaPredicted RBP13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 GPX3P22352 226 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 GPC1P35052 558 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 MC3RP41968 323 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 DCAF7P61962 342 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 HSPB3Q12988 150 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 INAQ16352 499 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 PRR30Q53SZ7 412 aaPredicted RBP13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 FHL5Q5TD97 284 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 EPGNQ6UW88 154 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 FAM47EQ6ZV65 393 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 NATD1Q8N6N6 113 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 C17orf47Q8NEP4 570 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 CEP70Q8NHQ1 597 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 ACTRT2Q8TDY3 377 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 SGCZQ96LD1 299 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 DPY30Q9C005 99 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 TIMMDC1Q9NPL8 285 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 TAS2R9Q9NYW1 312 aa13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 C19orf53Q9UNZ5 99 aaPredicted RBP13.41□□□□□ -0.26
SQSTM1-205ENST00000464493 A0A1W2PRB8 838 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 UPK1AO00322 258 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 NME2P1O60361 137 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 COQ9O75208 318 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 RASAL1O95294 804 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 IFI6P09912 130 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 ALDOCP09972 364 aaKnown RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 PLA2G2AP14555 144 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 DRD5P21918 477 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 NME2P22392 152 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 PPICP45877 212 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 NRG3P56975 720 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 MLC1Q15049 377 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 PGS1Q32NB8 556 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 ZNF791Q3KP31 576 aaPredicted RBP13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 LYPD8Q6UX82 237 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 RTL4Q6ZR62 310 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 GALNTL5Q7Z4T8 443 aa13.4□□□□□ -0.26
SQSTM1-205ENST00000464493 MDGA2Q7Z553 956 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms