RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 ATP5IP56385 69 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 B3GALT5-AS1P59052 145 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 CBX1P83916 185 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RELQ04864 619 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 EXOSC7Q15024 291 aaKnown RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 HERC3Q15034 1050 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RBMS2Q15434 407 aaKnown RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 CCL14Q16627 93 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZNF311Q5JNZ3 666 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RABGAP1LQ5R372 815 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RTL6Q6ICC9 239 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ASPHD2Q6ICH7 369 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 NIPAL3Q6P499 406 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RHBDF2Q6PJF5 856 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 CBLN3Q6UW01 205 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 CEACAM20Q6UY09 585 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 TMEM64Q6YI46 380 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 PAQR9Q6ZVX9 377 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 COPS6Q7L5N1 327 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZDHHC17Q8IUH5 632 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 BBS5Q8N3I7 341 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 DNAJC22Q8N4W6 341 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RBMXL3Q8N7X1 1067 aaKnown RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 FAM98AQ8NCA5 519 aaKnown RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 BHLHE23Q8NDY6 225 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZNF397Q8NF99 534 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 AKR7LQ8NHP1 331 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 C16orf52Q8NHV5 167 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 PIK3R3Q92569 461 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 DHTKD1Q96HY7 919 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 NSL1Q96IY1 281 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 VPS35Q96QK1 796 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RAB40CQ96S21 281 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 AGPAT1Q99943 283 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 GON7Q9BXV9 100 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 LAT2Q9GZY6 243 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RBM38Q9H0Z9 239 aaKnown RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 SLC26A1Q9H2B4 701 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 RIOX1Q9H6W3 641 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZNF665Q9H7R5 613 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 CD209Q9NNX6 404 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 SDR39U1Q9NRG7 319 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 TRNAU1APQ9NX07 287 aaKnown RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 OR6C2Q9NZP2 312 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 P2RX2Q9UBL9 471 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 LHX3Q9UBR4 397 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZNF490Q9ULM2 529 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZNF236Q9UL36 1845 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 USP9XQ93008 2570 aaPredicted RBP4.66□□□□□ -1.66
HOXB3-203ENST00000464266 ZMYM6O95789 1325 aa4.66□□□□□ -1.66
HOXB3-203ENST00000464266 OTOGLQ3ZCN5 2332 aa4.65□□□□□ -1.66
HOXB3-203ENST00000464266 IGLV5-52A0A0A0MRZ9 124 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 GSAPA4D1B5 854 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 EPOPA6NHQ4 379 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 LRRIQ4A6NIV6 560 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 YJEFN3A6XGL0 299 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 C1QTNF3-AMACRE9PGA6 284 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 ARPC1BO15143 372 aaKnown RBP4.65□□□□□ -1.67
HOXB3-203ENST00000464266 B4GALT2O60909 372 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 TIMP1P01033 207 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 MT-ND2P03891 347 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 CSF2P04141 144 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 GP9P14770 177 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 CASQ1P31415 396 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 CA8P35219 290 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 RGS4P49798 205 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 BNC1Q01954 994 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 CNTN2Q02246 1040 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 LGALS3BPQ08380 585 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 TMED1Q13445 227 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 GPR50Q13585 617 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 TATDN3Q17R31 274 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 SPATS1Q496A3 300 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 DCAF10Q5QP82 559 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 FKBP1CQ5VVH2 108 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 C8orf82Q6P1X6 216 aaPredicted RBP4.65□□□□□ -1.67
HOXB3-203ENST00000464266 EFL1Q7Z2Z2 1120 aaKnown RBP4.65□□□□□ -1.67
HOXB3-203ENST00000464266 C5orf24Q7Z6I8 188 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 PIP4P1Q86T03 277 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 PLD3Q8IV08 490 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 MUC20Q8N307 709 aaPredicted RBP4.65□□□□□ -1.67
HOXB3-203ENST00000464266 SMRP1Q8NCR6 262 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 CCDC197Q8NCU1 140 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 OR2T12Q8NG77 320 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 OR13C5Q8NGS8 318 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 GOLGA5Q8TBA6 731 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 PNPT1Q8TCS8 783 aaKnown RBP4.65□□□□□ -1.67
HOXB3-203ENST00000464266 WRAP53Q9BUR4 548 aaKnown RBP4.65□□□□□ -1.67
HOXB3-203ENST00000464266 ZNF747Q9BV97 191 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 NFKBIZQ9BYH8 718 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 OR2B2Q9GZK3 357 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 CSTL1Q9H114 145 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 YY1AP1Q9H869 796 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 VIPAS39Q9H9C1 493 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 UBTD1Q9HAC8 227 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 HIF1ANQ9NWT6 349 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 HYPKQ9NX55 129 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 ZNF319Q9P2F9 582 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 TBX21Q9UL17 535 aa4.65□□□□□ -1.67
HOXB3-203ENST00000464266 SATB2Q9UPW6 733 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms