RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 SLC9A3P48764 834 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 PDLIM4P50479 330 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 CDH4P55283 916 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 GAGE5Q13069 117 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 GAGE6Q13070 117 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 ZBTB17Q13105 803 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 TRA2AQ13595 282 aaKnown RBP eCLIP5.35□□□□□ -1.55
SSR3-203ENST00000464138 KRBOX4Q5JUW0 171 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 KLC3Q6P597 504 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 FAM198BQ6UWH4 519 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 C16orf82Q7Z2V1 217 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 SETD3Q86TU7 594 aaPredicted RBP5.35□□□□□ -1.55
SSR3-203ENST00000464138 SAMD14Q8IZD0 417 aaPredicted RBP5.35□□□□□ -1.55
SSR3-203ENST00000464138 SLC34A3Q8N130 599 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 NKAIN3Q8N8D7 197 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 ZNF441Q8N8Z8 693 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 ZBTB8BQ8NAP8 495 aaPredicted RBP5.35□□□□□ -1.55
SSR3-203ENST00000464138 CCDC112Q8NEF3 446 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 NUDCD2Q8WVJ2 157 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 SEMA4DQ92854 862 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 KIAA1143Q96AT1 154 aaPredicted RBP5.35□□□□□ -1.55
SSR3-203ENST00000464138 DHX58Q96C10 678 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 NXNL1Q96CM4 212 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 EEF2KMTQ96G04 330 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 RPRD1AQ96P16 312 aaPredicted RBP5.35□□□□□ -1.55
SSR3-203ENST00000464138 NUP85Q9BW27 656 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 HIPK2Q9H2X6 1198 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 OPA3Q9H6K4 179 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 POPDC2Q9HBU9 364 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 KLHL1Q9NR64 748 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 XPO7Q9UIA9 1087 aaKnown RBP5.35□□□□□ -1.55
SSR3-203ENST00000464138 RNF215Q9Y6U7 377 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 APCP25054 2843 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 POLQO75417 2590 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 DOCK4Q8N1I0 1966 aa5.35□□□□□ -1.55
SSR3-203ENST00000464138 PDZD2O15018 2839 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 NF1P21359 2839 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 RP1L1Q8IWN7 2480 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 A0A0B4J293 547 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ASPDHA6ND91 283 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 EFCAB7A8K855 629 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 MKRN2OSH3BPM6 223 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 RNF103O00237 685 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 KLRC4O43908 158 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ZNF821O75541 412 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 WISP2O76076 250 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 RECQL5O94762 991 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 H1F0P07305 194 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 TRIM49P0CI25 452 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 TRIM49CP0CI26 452 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 FGF3P11487 239 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 CDH1P12830 882 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 CCL4P13236 92 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 EEF1B2P24534 225 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 CCR1P32246 355 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ACADSBP45954 432 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 UQCRFS1P47985 274 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ARCN1P48444 511 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 RGS7P49802 495 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 CDC20Q12834 499 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 CAMK2DQ13557 499 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 CUL2Q13617 745 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 C16orf72Q14CZ0 275 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 SYPL2Q5VXT5 272 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 FBXL22Q6P050 247 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 PACS1Q6VY07 963 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 TUBA1AQ71U36 451 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 CENPVQ7Z7K6 275 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 TAC4Q86UU9 113 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ZNF595Q8IYB9 648 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 Q8N9G6 341 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 DCAF4L2Q8NA75 395 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 LINC00301Q8NCQ3 95 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 KIAA0895Q8NCT3 520 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 OR52K2Q8NGK3 314 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 MOCOSQ96EN8 888 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ZNF582Q96NG8 517 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 PSMB7Q99436 277 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 TUBA1CQ9BQE3 449 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 NAA11Q9BSU3 229 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 WACQ9BTA9 647 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 LRRC1Q9BTT6 524 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 LMF2Q9BU23 707 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 FNDC11Q9BVV2 318 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 BLZF1Q9H2G9 400 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ZSCAN16Q9H4T2 348 aaPredicted RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 SLA2Q9H6Q3 261 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 DDX31Q9H8H2 851 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 CNOT10Q9H9A5 744 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 NPAP1Q9NZP6 1156 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 PILRAQ9UKJ1 303 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 COQ4Q9Y3A0 265 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.34□□□□□ -1.55
SSR3-203ENST00000464138 CSMD1Q96PZ7 3565 aa5.34□□□□□ -1.55
SSR3-203ENST00000464138 ZNF106Q9H2Y7 1883 aaKnown RBP5.34□□□□□ -1.55
SSR3-203ENST00000464138 ESPL1Q14674 2120 aa5.33□□□□□ -1.56
SSR3-203ENST00000464138 PRSS51A0A1B0GVH4 220 aa5.33□□□□□ -1.56
SSR3-203ENST00000464138 K7ERQ8 282 aa5.33□□□□□ -1.56
SSR3-203ENST00000464138 POLR2DO15514 142 aaKnown RBP5.33□□□□□ -1.56
SSR3-203ENST00000464138 RAD1O60671 282 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms