RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TBX6O95947 436 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 RPLP0P05388 317 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CD247P20963 164 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 ALDH4A1P30038 563 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CHI3L1P36222 383 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 GGT2P36268 569 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 XCR1P46094 333 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 DSTNP60981 165 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 GPLD1P80108 840 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 MEF2AQ02078 507 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 HHEXQ03014 270 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 TSTA3Q13630 321 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 HEPACAMQ14CZ8 416 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 NPTX1Q15818 432 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CTF1Q16619 201 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 SLC5A12Q1EHB4 618 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 MICAQ29983 383 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF605Q86T29 641 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 PARP8Q8N3A8 854 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 RAB42Q8N4Z0 105 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 Q8N9G6 341 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 ZNF740Q8NDX6 193 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 TTLQ8NG68 377 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 B4GALNT2Q8NHY0 566 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 NFKBIDQ8NI38 313 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 SPPL2AQ8TCT8 520 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CIDECQ96AQ7 238 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 YIPF6Q96EC8 236 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 RAB11FIP5Q9BXF6 653 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 OSGEPL1Q9H4B0 414 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 A4GALTQ9NPC4 353 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 MIEF1Q9NQG6 463 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 ACSS1Q9NUB1 689 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 TBC1D23Q9NUY8 699 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 TBCCD1Q9NVR7 557 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 SCHIP1Q9P0W5 487 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 CPNE7Q9UBL6 633 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 WARS2Q9UGM6 360 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 ENTPD2Q9Y5L3 495 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 HEMK1Q9Y5R4 338 aaPredicted RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 ENPP4Q9Y6X5 453 aa9.34□□□□□ -0.91
PTPRD-207ENST00000463477 MDC1Q14676 2089 aaKnown RBP9.34□□□□□ -0.91
PTPRD-207ENST00000463477 APC2O95996 2303 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 A0A1W2PPV9 198 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 D6RAR5 112 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PDPK1O15530 556 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 BCAS1O75363 584 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 CLEC3AO75596 197 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PDE9AO76083 593 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 INMTO95050 263 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF182P17025 639 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 RHCEP18577 417 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 CD1CP29017 333 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 FMO3P31513 532 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 KRT20P35900 424 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 SLC19A1P41440 591 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PDX1P52945 283 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 MAPK12P53778 367 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PCBP4P57723 403 aaKnown RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 OR1D5P58170 312 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 UBE2IP63279 158 aaKnown RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 KCNC4Q03721 635 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ZFP36L1Q07352 338 aaKnown RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PRSS53Q2L4Q9 553 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 UBE2UQ5VVX9 321 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 REEP3Q6NUK4 255 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 KLHL35Q6PF15 583 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 FAM92BQ6ZTR7 304 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 NUDT13Q86X67 352 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 RNF130Q86XS8 419 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 CCDC71Q8IV32 467 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ENTHD1Q8IYW4 607 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF540Q8NDQ6 660 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 OR10G2Q8NGC3 310 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 FAM81AQ8TBF8 368 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 RGMAQ96B86 450 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 TM4SF18Q96CE8 201 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 IL17FQ96PD4 163 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 SLC38A3Q99624 504 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PIP5K1AQ99755 562 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 DPYSL5Q9BPU6 564 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 CCDC86Q9H6F5 360 aaKnown RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 DDX31Q9H8H2 851 aaKnown RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 UCK1Q9HA47 277 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PRM3Q9NNZ6 103 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ACOT13Q9NPJ3 140 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 FKBP14Q9NWM8 211 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 EHD3Q9NZN3 535 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ZNF624Q9P2J8 865 aaPredicted RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 ERVK-18Q9QC07 812 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 TAC3Q9UHF0 121 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 KCND3Q9UK17 655 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 PCDHGA6Q9Y5G7 932 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 SNRNP200O75643 2136 aaKnown RBP9.33□□□□□ -0.92
PTPRD-207ENST00000463477 DMXL2Q8TDJ6 3036 aa9.33□□□□□ -0.92
PTPRD-207ENST00000463477 URB1O60287 2271 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms