RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 AIPL1Q9NZN9 384 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 TUBGCP4Q9UGJ1 667 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 IKZF3Q9UKT9 509 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 ZNF346Q9UL40 294 aaKnown RBP4.99□□□□□ -1.61
COPS3-205ENST00000463097 LRP12Q9Y561 859 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 AP4B1Q9Y6B7 739 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 RNF215Q9Y6U7 377 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 CCDC7Q96M83 1385 aa4.99□□□□□ -1.61
COPS3-205ENST00000463097 AQRO60306 1485 aaKnown RBP eCLIP4.99□□□□□ -1.61
COPS3-205ENST00000463097 SYNRGQ9UMZ2 1314 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 KIF27Q86VH2 1401 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 LOC105371242A0A075B767 164 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 LOC390937A0A1W2PQ73 354 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 TTC26A0AVF1 554 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 ALOX15BO15296 676 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 CTAGE5O15320 804 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 TRMUO75648 421 aaKnown RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 NEBLO76041 1014 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 NXPH2O95156 264 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 NADKO95544 446 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 UQCRC2P22695 453 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 PEX19P40855 299 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 LINC00205P59089 165 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 ABCE1P61221 599 aaKnown RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 GBE1Q04446 702 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 PJVKQ0ZLH3 352 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 HYAL1Q12794 435 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 ILF3Q12906 894 aaKnown RBP eCLIP4.98□□□□□ -1.61
COPS3-205ENST00000463097 ITPK1Q13572 414 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 CAMK4Q16566 473 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 GTDC1Q4AE62 458 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 TCHHL1Q5QJ38 904 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 ATF7IP2Q5U623 682 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 DMKNQ6E0U4 476 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 PYHIN1Q6K0P9 492 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 C9orf139Q6ZV77 190 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 SH2D5Q6ZV89 423 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 EFL1Q7Z2Z2 1120 aaKnown RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 LACC1Q8IV20 430 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 SLC22A9Q8IVM8 553 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 CENPSQ8N2Z9 138 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 ANKFN1Q8N957 763 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 OR5AP2Q8NGF4 316 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 OR8J1Q8NGP2 316 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 RPLP0P6Q8NHW5 317 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 NUDCD2Q8WVJ2 157 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 SPRYD4Q8WW59 207 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 FRAT1Q92837 279 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 EMG1Q92979 244 aaKnown RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 DHTKD1Q96HY7 919 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 TPD52L3Q96J77 140 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 FAM218AQ96MZ4 157 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 CCDC77Q9BR77 488 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 PINK1Q9BXM7 581 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 ALG9Q9H6U8 611 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 APMAPQ9HDC9 416 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 ZFP57Q9NU63 452 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 C1orf123Q9NWV4 160 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 TEX10Q9NXF1 929 aaPredicted RBP4.98□□□□□ -1.61
COPS3-205ENST00000463097 GPR83Q9NYM4 423 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 GHRLQ9UBU3 117 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 TMED5Q9Y3A6 229 aa4.98□□□□□ -1.61
COPS3-205ENST00000463097 CCDC144AA2RUR9 1427 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 AKNAQ7Z591 1439 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 LRRC30A6NM36 301 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 WASHC1A8K0Z3 465 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 A8MU76 341 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 IMPA2O14732 288 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 ZNF208O43345 1280 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 FHP07954 510 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 ZNF44P15621 663 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 GPR183P32249 361 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 ZFP36L2P47974 494 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 LEPRP48357 1165 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 RAG2P55895 527 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 ACTR3P61158 418 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 NOP14P78316 857 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 RBBP4Q09028 425 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 SLC17A1Q14916 467 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 TEAD2Q15562 447 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 IMMTQ16891 758 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 IZUMO4Q1ZYL8 232 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 RHBDD2Q6NTF9 364 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 ZNF562Q6V9R5 426 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 ZNF841Q6ZN19 808 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 Q7L0L9 218 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 C1QL2Q7Z5L3 287 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 NET1Q7Z628 596 aaPredicted RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 RBM23Q86U06 439 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 UBQLNLQ8IYU4 475 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 TMEM178AQ8NBL3 297 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 FBXO25Q8TCJ0 367 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 ATP8B4Q8TF62 1192 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 CNOT6LQ96LI5 555 aaKnown RBP4.97□□□□□ -1.61
COPS3-205ENST00000463097 TCEANC2Q96MN5 208 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 POLD4Q9HCU8 107 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 NIP7Q9Y221 180 aaKnown RBP eCLIP4.97□□□□□ -1.61
COPS3-205ENST00000463097 RNF6Q9Y252 685 aa4.97□□□□□ -1.61
COPS3-205ENST00000463097 SLCO1B1Q9Y6L6 691 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms