RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SERTM1A2A2V5 107 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 OR14I1A6ND48 311 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 NPIPA2E9PIF3 369 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 NPIPA3F8WFD2 350 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 TP53I11O14683 189 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ATP6AP2O75787 350 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 CBX7O95931 251 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 NUDT17P0C025 328 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 DRD2P14416 443 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 CPA3P15088 417 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 S1PR1P21453 382 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ABCD3P28288 659 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 GSTM5P46439 218 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 MRPS35P82673 323 aaKnown RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 BTKQ06187 659 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF763Q0D2J5 394 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 MGAT2Q10469 447 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 MAP4K2Q12851 820 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 DUSP8Q13202 625 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 HEPACAMQ14CZ8 416 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 PCLAFQ15004 111 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 EXOSC7Q15024 291 aaKnown RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 CDSNQ15517 529 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF630Q2M218 657 aaPredicted RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF628Q5EBL2 1059 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 SPDYAQ5MJ70 313 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 TBCELQ5QJ74 424 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 GALNT18Q6P9A2 607 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 TRILQ7L0X0 811 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 PRR22Q8IZ63 422 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 RIBC1Q8N443 379 aaPredicted RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 MARVELD2Q8N4S9 558 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ADCY4Q8NFM4 1077 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 OR52R1Q8NGF1 315 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 C16orf78Q8WTQ4 265 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 DIO2Q92813 273 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 JSRP1Q96MG2 331 aaPredicted RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF681Q96N22 645 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 IQCGQ9H095 443 aaKnown RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 NXF5Q9H1B4 397 aaKnown RBP9.35□□□□□ -0.91
SF3A3-204ENST00000462258 PROK2Q9HC23 129 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ZFP64Q9NPA5 681 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 CHST11Q9NPF2 352 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 GIMAP4Q9NUV9 329 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 OXSMQ9NWU1 459 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 MKS1Q9NXB0 559 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 COQ3Q9NZJ6 369 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 B4GALT7Q9UBV7 327 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF639Q9UID6 485 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 PLLPQ9Y342 182 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 NPFFR2Q9Y5X5 522 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 ARHGAP21Q5T5U3 1957 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 NINQ8N4C6 2090 aa9.35□□□□□ -0.91
SF3A3-204ENST00000462258 A0A1B0GVC2 190 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 TLDC2A0PJX2 215 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 FIGNL2A6NMB9 653 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 AQP7O14520 342 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 BCKDKO14874 412 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 PPM1BO75688 479 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 ANXA4P09525 319 aaPredicted RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 PCSK2P16519 638 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 ENDOUP21128 410 aaKnown RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 GDF1P27539 372 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SOX18P35713 384 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 MASP1P48740 699 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 MAN2A2P49641 1150 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 RPP38P78345 283 aaKnown RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SLC18A2Q05940 514 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 IFFO1Q0D2I5 559 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 PLCXD2Q0VAA5 305 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 EMC4Q5J8M3 183 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 BICRALQ6AI39 1079 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SP5Q6BEB4 398 aaPredicted RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 C10orf107Q8IVU9 208 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SAMD14Q8IZD0 417 aaPredicted RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 RPRMLQ8N4K4 120 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SIMC1Q8NDZ2 872 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 OR5M9Q8NGP3 310 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 OR9A2Q8NGT5 310 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SPPL2AQ8TCT8 520 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 ZNF675Q8TD23 568 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 AENQ8WTP8 325 aaKnown RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SDCCAG3Q96C92 435 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 CTHRC1Q96CG8 243 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 C11orf24Q96F05 449 aaPredicted RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 RILPQ96NA2 401 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SECISBP2Q96T21 854 aaKnown RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SHCBP1LQ9BZQ2 653 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 LDAHQ9H6V9 325 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 EXO5Q9H790 373 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 TNFRSF12AQ9NP84 129 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 PNPLA3Q9NST1 481 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SIRT5Q9NXA8 310 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 EHD3Q9NZN3 535 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 SENP1Q9P0U3 644 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 TNFRSF10DQ9UBN6 386 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 PRODH2Q9UF12 536 aa9.34□□□□□ -0.91
SF3A3-204ENST00000462258 POLR3HQ9Y535 204 aaPredicted RBP9.34□□□□□ -0.91
SF3A3-204ENST00000462258 FREM3P0C091 2139 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms