RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 TRMT12Q53H54 448 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 C6orf136Q5SQH8 315 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 MDGA2Q7Z553 956 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 R3HCC1LQ7Z5L2 792 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 SULF2Q8IWU5 870 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 CPSF7Q8N684 471 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 ZNF441Q8N8Z8 693 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 GOLM1Q8NBJ4 401 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 PSD4Q8NDX1 1056 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 FAM13CQ8NE31 585 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 ZFP28Q8NHY6 868 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 RAB3IL1Q8TBN0 382 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 ADIPOR1Q96A54 375 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 PPCDCQ96CD2 204 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 CTHRC1Q96CG8 243 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 ERP27Q96DN0 273 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 SPACA9Q96E40 222 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 FRMD6Q96NE9 622 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 SORT1Q99523 831 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 C1orf50Q9BV19 199 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 MANSC1Q9H8J5 431 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 SACM1LQ9NTJ5 587 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 PNPOQ9NVS9 261 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 THAP1Q9NVV9 213 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 TAS2R7Q9NYW3 318 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 SH3BP4Q9P0V3 963 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 SEC14L3Q9UDX4 400 aa9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 EXO1Q9UQ84 846 aaKnown RBP9.78□□□□□ -0.84
TRAPPC12-213ENST00000461577 HMGB1P1B2RPK0 211 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 NPIPA5E9PKD4 350 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 PDPK1O15530 556 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 TBX19O60806 448 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 COQ9O75208 318 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 SLITRK5O94991 958 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 FBXO45P0C2W1 286 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ZNF24P17028 368 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 CNR1P21554 472 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 GPX3P22352 226 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 MST1P26927 711 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 GPC1P35052 558 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 RPL3P39023 403 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 TMED10P49755 219 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 TDGF1P3P51864 188 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 DCAF7P61962 342 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 PLGLB1Q02325 96 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 EIF2S3LQ2VIR3 472 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ZNF791Q3KP31 576 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 TTMPQ5BVD1 217 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 FHL5Q5TD97 284 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 IL23RQ5VWK5 629 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 SLC22A10Q63ZE4 541 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ZNF324BQ6AW86 544 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ANKRD26P1Q6NSI1 321 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 TMEM107Q6UX40 140 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 LYPD8Q6UX82 237 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 GFRALQ6UXV0 394 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 C17orf47Q8NEP4 570 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 OR5M3Q8NGP4 307 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 MTERF3Q96E29 417 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 LCORQ96JN0 433 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 AMDHD1Q96NU7 426 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 SH3GL2Q99962 352 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 SLX1AQ9BQ83 275 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ITPAQ9BY32 194 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 NUF2Q9BZD4 464 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ACBD3Q9H3P7 528 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 GLIPR2Q9H4G4 154 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 AKTIPQ9H8T0 292 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 NOP53Q9NZM5 478 aaKnown RBP9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 HAO1Q9UJM8 370 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 NPIPA1Q9UND3 350 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 NPFFR2Q9Y5X5 522 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 ESPL1Q14674 2120 aa9.77□□□□□ -0.85
TRAPPC12-213ENST00000461577 FASNP49327 2511 aaKnown RBP9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 A0A087WV62 115 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 G3V3Y1 287 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 ACOT7O00154 380 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 TP53I11O14683 189 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 TFECO14948 347 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 ACOX3O15254 700 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 PLOD3O60568 738 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 SNNO75324 88 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 UNC5CO95185 931 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 CCL3P10147 92 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 KITP10721 976 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 RFC3P40938 356 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 MC3RP41968 323 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 PPICP45877 212 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 EMDP50402 254 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 MANFP55145 182 aaKnown RBP9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 KCNK10P57789 538 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 RPP38P78345 283 aaKnown RBP9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 EMX2Q04743 252 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 RBPJQ06330 500 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 ZNF155Q12901 538 aaPredicted RBP9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 HSPB3Q12988 150 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 DUSP8Q13202 625 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 NNATQ16517 81 aa9.76□□□□□ -0.85
TRAPPC12-213ENST00000461577 NTRK2Q16620 822 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms