RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 SHANK1Q9Y566 2161 aa18.53■□□□□ 0.56
SNAPC3-204ENST00000461041 SPENQ96T58 3664 aaKnown RBP18.53■□□□□ 0.56
SNAPC3-204ENST00000461041 KLF11O14901 512 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 PDPK1O15530 556 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 CRYABP02511 175 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 GPX3P22352 226 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 MAD2L1Q13257 205 aaPredicted RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 PTGR1Q14914 329 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 ZNF324BQ6AW86 544 aaPredicted RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 RTL4Q6ZR62 310 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 TAGAPQ8N103 731 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 FAM98AQ8NCA5 519 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 PSD4Q8NDX1 1056 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 OR7G2Q8NG99 324 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 DNAJB8Q8NHS0 232 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 MTERF3Q96E29 417 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 AMDHD1Q96NU7 426 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 MEAF6Q9HAF1 191 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 RYDENQ9NUL5 291 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 OLAHQ9NV23 265 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 ZNF446Q9NWS9 450 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 SH3BP4Q9P0V3 963 aa18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 EIF3LQ9Y262 564 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-204ENST00000461041 ASPDHA6ND91 283 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 SCAMP2O15127 329 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 PLOD3O60568 738 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 BCAS2O75934 225 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 FBXO45P0C2W1 286 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 HPCAL1P37235 193 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 EMDP50402 254 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 PPP2R2AP63151 447 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 SRSF11Q05519 484 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 ZNF791Q3KP31 576 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 FHL5Q5TD97 284 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 R3HCC1LQ7Z5L2 792 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 SULF2Q8IWU5 870 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 GOLM1Q8NBJ4 401 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 C17orf47Q8NEP4 570 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 NR4A3Q92570 626 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 CIDECQ96AQ7 238 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 SPACA9Q96E40 222 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 SGCZQ96LD1 299 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 FRMD6Q96NE9 622 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 SLX1AQ9BQ83 275 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 ITPAQ9BY32 194 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 ACBD3Q9H3P7 528 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 ASIC5Q9NY37 505 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 NOP53Q9NZM5 478 aaKnown RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 MARCOQ9UEW3 520 aaPredicted RBP18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 PRODH2Q9UF12 536 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 ATP6V1HQ9UI12 483 aa18.51■□□□□ 0.55
SNAPC3-204ENST00000461041 UQCRHLA0A096LP55 91 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 KLRC4-KLRK1H3BQV0 150 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 HDAC3O15379 428 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 SLITRK5O94991 958 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 CBX6O95503 412 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 KITP10721 976 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 G6PDP11413 515 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 GNLYP22749 145 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 RPL3P39023 403 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 MC3RP41968 323 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 UQCRFS1P47985 274 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 KCNC4Q03721 635 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 TMEM107Q6UX40 140 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 TMEM64Q6YI46 380 aa18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 WDR75Q8IWA0 830 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 CPSF7Q8N684 471 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 NXF5Q9H1B4 397 aaKnown RBP18.5■□□□□ 0.55
SNAPC3-204ENST00000461041 A0A087WV62 115 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 SLCO1B7G3V0H7 640 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 PLOD2O00469 737 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 SDHDO14521 159 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 PEX1O43933 1283 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 EDN3P14138 238 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 DDX5P17844 614 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 LBPP18428 481 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 FRKP42685 505 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 MEOX1P50221 254 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 GPR85P60893 370 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 MRPL49Q13405 166 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 NNATQ16517 81 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 LARP4Q71RC2 724 aaKnown RBP eCLIP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 ZNF551Q7Z340 670 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 DND1Q8IYX4 353 aaKnown RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 KRTCAP2Q8N6L1 136 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 OR7A2PQ8NGA2 310 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 ZBED6CLQ96FA7 236 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 LCORQ96JN0 433 aaPredicted RBP18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 DEPPQ9NTK1 212 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 NPFFR2Q9Y5X5 522 aa18.49■□□□□ 0.55
SNAPC3-204ENST00000461041 TRPC5OSA6NMA1 111 aa18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 NME6O75414 186 aaPredicted RBP18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 CCL3P10147 92 aa18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 PRPS1L1P21108 318 aa18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 MST1P26927 711 aa18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 PPICP45877 212 aa18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 TDGF1P3P51864 188 aa18.48■□□□□ 0.55
SNAPC3-204ENST00000461041 DIO3P55073 304 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms