RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 CYB561P49447 251 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 MEOX1P50221 254 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 RPL38P63173 70 aaKnown RBP13.61□□□□□ -0.23
NCK1-202ENST00000460960 FOLH1Q04609 750 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 DUSP2Q05923 314 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 MYBPHQ13203 477 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 ATG16L1Q676U5 607 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 GALNT18Q6P9A2 607 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 FGD2Q7Z6J4 655 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 WDR75Q8IWA0 830 aaKnown RBP13.61□□□□□ -0.23
NCK1-202ENST00000460960 CHERPQ8IWX8 916 aaKnown RBP13.61□□□□□ -0.23
NCK1-202ENST00000460960 ZNF595Q8IYB9 648 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 ACBD4Q8NC06 268 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 CLHC1Q8NHS4 586 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.61□□□□□ -0.23
NCK1-202ENST00000460960 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 ASB5Q8WWX0 329 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 FCRL1Q96LA6 429 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 C1orf50Q9BV19 199 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 NMRK1Q9NWW6 199 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 SIRT5Q9NXA8 310 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 BAIAP2L1Q9UHR4 511 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 CES1P1Q9UKY3 287 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 MMACHCQ9Y4U1 282 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 HCFC1P51610 2035 aa13.61□□□□□ -0.23
NCK1-202ENST00000460960 GNG14A0A1W2PPG7 69 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 SDHDO14521 159 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 ZNF195O14628 629 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 CTNSO60931 367 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 SDC1P18827 310 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 HSD17B7P56937 341 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 SLC26A5P58743 744 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 TMEM211Q6ICI0 200 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 FAM47EQ6ZV65 393 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 TRIM42Q8IWZ5 723 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 MARVELD2Q8N4S9 558 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 CDC26Q8NHZ8 85 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 FAM57AQ8TBR7 257 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 LRRC8CQ8TDW0 803 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 DYDC1Q8WWB3 177 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 PPWD1Q96BP3 646 aaKnown RBP13.6□□□□□ -0.23
NCK1-202ENST00000460960 TREX2Q9BQ50 279 aaPredicted RBP13.6□□□□□ -0.23
NCK1-202ENST00000460960 ALOXE3Q9BYJ1 711 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 AKTIPQ9H8T0 292 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 KCNJ16Q9NPI9 418 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 MED4Q9NPJ6 270 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 NPDC1Q9NQX5 325 aaPredicted RBP13.6□□□□□ -0.23
NCK1-202ENST00000460960 PNO1Q9NRX1 252 aaKnown RBP13.6□□□□□ -0.23
NCK1-202ENST00000460960 RNF6Q9Y252 685 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 PCDHA9Q9Y5H5 950 aa13.6□□□□□ -0.23
NCK1-202ENST00000460960 HRKO00198 91 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 CLDN4O14493 209 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 HS6ST1O60243 411 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 PDE9AO76083 593 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 CHRNB4P30926 498 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 ALDH9A1P49189 494 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 IGLV3-21P80748 117 aaPredicted RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 C6orf136Q5SQH8 315 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 FAM71E1Q6IPT2 247 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 CCDC71Q8IV32 467 aaPredicted RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 ZNF321PQ8N8H1 164 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 NFAM1Q8NET5 270 aaPredicted RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 RND1Q92730 232 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 GFM2Q969S9 779 aaKnown RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 TUBGCP3Q96CW5 907 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 TSSK3Q96PN8 268 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 WDR55Q9H6Y2 383 aaPredicted RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 MEAF6Q9HAF1 191 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 MS4A12Q9NXJ0 267 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 TNFRSF10DQ9UBN6 386 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 MRPS33Q9Y291 106 aaKnown RBP13.59□□□□□ -0.23
NCK1-202ENST00000460960 SPACA6W5XKT8 324 aa13.59□□□□□ -0.23
NCK1-202ENST00000460960 PRRC2AP48634 2157 aaKnown RBP13.58□□□□□ -0.24
NCK1-202ENST00000460960 GOLGA8QA0A0J9YX86 632 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 GOLGA8OA6NCC3 632 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 GOLGA8NF8WBI6 632 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 MYO1DO94832 1006 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 LRATO95237 230 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 GPR75O95800 540 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 BCKDHAP12694 445 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 SOX18P35713 384 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 IST1P53990 364 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 GUCY1A3Q02108 690 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 ZNF763Q0D2J5 394 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 SLC9B1Q4ZJI4 515 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 OR52E8Q6IFG1 317 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 ANKRD26P1Q6NSI1 321 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 SLC48A1Q6P1K1 146 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 LGI4Q8N135 537 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 POGLUT1Q8NBL1 392 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 LILRB4Q8NHJ6 448 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 PTPMT1Q8WUK0 201 aaPredicted RBP13.58□□□□□ -0.24
NCK1-202ENST00000460960 TANKQ92844 425 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 THOC1Q96FV9 657 aaKnown RBP13.58□□□□□ -0.24
NCK1-202ENST00000460960 MAGEB18Q96M61 343 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 TMUB1Q9BVT8 246 aa13.58□□□□□ -0.24
NCK1-202ENST00000460960 ZNF223Q9UK11 482 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms