RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 HSPBAP1Q96EW2 488 aa21.38■■□□□ 1.01
CBX3-204ENST00000456948 TSPAN10Q9H1Z9 355 aaPredicted RBP21.38■■□□□ 1.01
CBX3-204ENST00000456948 ZNF639Q9UID6 485 aa21.38■■□□□ 1.01
CBX3-204ENST00000456948 ERRFI1Q9UJM3 462 aaPredicted RBP21.38■■□□□ 1.01
CBX3-204ENST00000456948 ACOX3O15254 700 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 SLC19A2O60779 497 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 NADKO95544 446 aaPredicted RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 ABOP16442 354 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 NAGAP17050 411 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 S1PR1P21453 382 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 PPIAP62937 165 aaKnown RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 RPL38P63173 70 aaKnown RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 KCNJ2P63252 427 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 MGAT2Q10469 447 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 CEBPEQ15744 281 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 CHI3L2Q15782 390 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 NTRK2Q16620 822 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 ATP6AP1LQ52LC2 224 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 BEND6Q5SZJ8 279 aaPredicted RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 FAM180BQ6P0A1 224 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 SIAH3Q8IW03 269 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 ZNF441Q8N8Z8 693 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 OR52R1Q8NGF1 315 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.37■■□□□ 1.01
CBX3-204ENST00000456948 PAQR8Q8TEZ7 354 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 ADIPOR1Q96A54 375 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 LCORQ96JN0 433 aaPredicted RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 SECISBP2Q96T21 854 aaKnown RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 PAIP2Q9BPZ3 127 aaKnown RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 IL1RL2Q9HB29 575 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 TAS2R9Q9NYW1 312 aa21.37■■□□□ 1.01
CBX3-204ENST00000456948 BOKQ9UMX3 212 aaPredicted RBP21.37■■□□□ 1.01
CBX3-204ENST00000456948 PIP5K1BO14986 540 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 HS6ST1O60243 411 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 ZNF354AO60765 605 aaPredicted RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 GPX3P22352 226 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 RPL3P39023 403 aaKnown RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 NCBP2P52298 156 aaKnown RBP eCLIP21.36■■□□□ 1.01
CBX3-204ENST00000456948 EXOSC7Q15024 291 aaKnown RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 RPS6KA2Q15349 733 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 UGT3A2Q3SY77 523 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 TRMT12Q53H54 448 aaKnown RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 ZNF628Q5EBL2 1059 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 R3HCC1LQ7Z5L2 792 aaKnown RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 SPPL2CQ8IUH8 684 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 FBXW8Q8N3Y1 598 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 OR9A2Q8NGT5 310 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 OR6Y1Q8NGX8 325 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 RELTQ969Z4 430 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 PKNOX2Q96KN3 472 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 PSMG3-AS1Q96PY0 264 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 TUBB1Q9H4B7 451 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 ZDHHC2Q9UIJ5 367 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 PTGDR2Q9Y5Y4 395 aa21.36■■□□□ 1.01
CBX3-204ENST00000456948 DIDO1Q9BTC0 2240 aaKnown RBP21.36■■□□□ 1.01
CBX3-204ENST00000456948 MYO1GB0I1T2 1018 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 TMEM233B4DJY2 109 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 PRRG2O14669 202 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 LSM1O15116 133 aaKnown RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 CDC40O60508 579 aaKnown RBP eCLIP21.35■■□□□ 1.01
CBX3-204ENST00000456948 PLOD3O60568 738 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 COQ9O75208 318 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 CCL3P10147 92 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 ESRRAP11474 423 aaPredicted RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 GP1BBP13224 206 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 PCSK2P16519 638 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 DRD5P21918 477 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 RFC3P40938 356 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 PPICP45877 212 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 ABCE1P61221 599 aaKnown RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 MRPS35P82673 323 aaKnown RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 LTB4RQ15722 352 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 RFTN2Q52LD8 501 aaPredicted RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 RNFT1Q5M7Z0 435 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 C1QL3Q5VWW1 255 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 LYPD8Q6UX82 237 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 FJX1Q86VR8 437 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 OR5M3Q8NGP4 307 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 ZFP28Q8NHY6 868 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 DIO2Q92813 273 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 PPCDCQ96CD2 204 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 REEP4Q9H6H4 257 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 DEPPQ9NTK1 212 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 B4GALT7Q9UBV7 327 aa21.35■■□□□ 1.01
CBX3-204ENST00000456948 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 USP9XQ93008 2570 aaPredicted RBP21.35■■□□□ 1.01
CBX3-204ENST00000456948 A0A087WV62 115 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 ANKRD33BA6NCL7 494 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 CBX7O95931 251 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 KRT20P35900 424 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 CA7P43166 264 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 DUSP2Q05923 314 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 MAD2L1Q13257 205 aaPredicted RBP21.34■■□□□ 1.01
CBX3-204ENST00000456948 STX3Q13277 289 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 ARHGAP11AQ6P4F7 1023 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 OR10G3Q8NGC4 313 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 OR2T11Q8NH01 316 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 KAT2AQ92830 837 aa21.34■■□□□ 1.01
CBX3-204ENST00000456948 MTERF3Q96E29 417 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms