RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 PDZK1P1A8MUH7 402 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 M0R3H8 397 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 TBX1O43435 398 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SOX14O95416 240 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 DLGAP3O95886 979 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 TIE1P35590 1138 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SOX9P48436 509 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SEPHS1P49903 392 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 ALDH6A1Q02252 535 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 ZNF750Q32MQ0 723 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SOWAHCQ53LP3 525 aaPredicted RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 ATAD3BQ5T9A4 648 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 PODNL1Q6PEZ8 512 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 CD300LDQ6UXZ3 194 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 WDR53Q7Z5U6 358 aaPredicted RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 POC5Q8NA72 575 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 OR14C36Q8NHC7 312 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 MGLLQ99685 303 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SLX1AQ9BQ83 275 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 CENPOQ9BU64 300 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 CDADC1Q9BWV3 514 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 MKRN2Q9H000 416 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 RNF167Q9H6Y7 350 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC28A3Q9HAS3 691 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 MOSPD1Q9UJG1 213 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 A8MU76 341 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 GUCY1B2O75343 617 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 ERAL1O75616 437 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 UGT2B17O75795 530 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 AIFM1O95831 613 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 LGI1O95970 557 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 DBTP11182 482 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 PTGER1P34995 402 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 FEN1P39748 380 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 TNFRSF4P43489 277 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SEC13P55735 322 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 ZNF181Q2M3W8 571 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 PARM1Q6UWI2 310 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 ATCAYQ86WG3 371 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 MFSD9Q8NBP5 474 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 GANCQ8TET4 914 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 TXNDC15Q96J42 360 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 Q96MT0 163 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 CTRCQ99895 268 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 SPATA5L1Q9BVQ7 753 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 C6orf62Q9GZU0 229 aaPredicted RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 MAN2C1Q9NTJ4 1040 aa17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 APOBEC3BQ9UH17 382 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-209ENST00000456560 LOC100506127A0A0U1RQW1 187 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 SNPHO15079 494 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 LRRC32Q14392 662 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 STEAP3Q658P3 488 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 ZNF425Q6IV72 752 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 TUBA3EQ6PEY2 450 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 SYCE2Q6PIF2 218 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 CCDC116Q8IYX3 515 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 AMER2Q8N7J2 671 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 TMEM145Q8NBT3 493 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 ELSPBP1Q96BH3 223 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 OTUB1Q96FW1 271 aaPredicted RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 CHCHD6Q9BRQ6 235 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 RPP25Q9BUL9 199 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 TAPBPLQ9BX59 468 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 AGAP5A6NIR3 686 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 SAGE2PA6NJ88 616 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 TAF4O00268 1085 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 HMGN2P05204 90 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 HSMCR30P0CW71 290 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 MAN2A2P49641 1150 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 ANXA11P50995 505 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 PRKAG1P54619 331 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 TARDBPQ13148 414 aaKnown RBP eCLIP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 OCLNQ16625 522 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 TSTQ16762 297 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 MEDAGQ5VYS4 303 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 C18orf63Q68DL7 685 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC48A1Q6P1K1 146 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 WDR36Q8NI36 951 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 FGF14Q92915 247 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 MOAP1Q96BY2 351 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 YIPF4Q9BSR8 244 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 KIR3DX1Q9H7L2 352 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 SIAEQ9HAT2 523 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 FBXW2Q9UKT8 454 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 SLC9A8Q9Y2E8 581 aa17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 LSM2Q9Y333 95 aaKnown RBP17.31■□□□□ 0.36
SEMA3B-209ENST00000456560 A0A0G2JPF8 293 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 A0A1W2PS29 197 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 HNRNPCL2B2RXH8 293 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 HNRNPCL3B7ZW38 293 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 H3BN98 237 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 HNRNPCL4P0DMR1 293 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 ALPPL2P10696 532 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 F3P13726 295 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 CERS1P27544 350 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 CMPK1P30085 196 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 RCVRNP35243 200 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 COX10Q12887 443 aa17.3■□□□□ 0.36
SEMA3B-209ENST00000456560 LASP1Q14847 261 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms