RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 DYSFO75923 2080 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 IFITM10A6NMD0 228 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PRKRAO75569 313 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC2A10O95528 541 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PDYNP01213 254 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CHI3L1P36222 383 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SCNN1AP37088 669 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RPS24P62847 133 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ARHGAP1Q07960 439 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TOP3AQ13472 1001 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TRAM2Q15035 370 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TIGD5Q53EQ6 642 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ATAT1Q5SQI0 421 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 GCNT6Q5T4J0 391 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RETSATQ6NUM9 610 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RFLNBQ8N5W9 214 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 NANOGP1Q8N7R0 232 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR5AK3PQ8NH89 298 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FANK1Q8TC84 345 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 GATAD2BQ8WXI9 593 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR4K3Q96R72 315 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SMAD5Q99717 465 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SLC22A4Q9H015 551 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SERHL2Q9H4I8 314 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 GPBP1L1Q9HC44 474 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 KLK11Q9UBX7 282 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ST3GAL5Q9UNP4 418 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TLR6Q9Y2C9 796 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDH15Q96QU1 1955 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 MCRIP1C9JLW8 97 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 K7ERQ8 282 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SOD1P00441 154 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 EIF4EP06730 217 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 UCHL1P09936 223 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 HK1P19367 917 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CR2P20023 1033 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 B4GALNT1Q00973 533 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 BNC1Q01954 994 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TPBGQ13641 420 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OVOS1Q6IE37 1185 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR7E24Q6IFN5 339 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RPTNQ6XPR3 784 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF621Q6ZSS3 439 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ZFP82Q8N141 532 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 FTMTQ8N4E7 242 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 LRRC52Q8N7C0 313 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 EFHBQ8N7U6 833 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 MTMR14Q8NCE2 650 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 DENND6BQ8NEG7 585 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR10G2Q8NGC3 310 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 OR52B4Q8NGK2 314 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF431Q8TF32 576 aaPredicted RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 RELTQ969Z4 430 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 TSPAN17Q96FV3 270 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 COQ10AQ96MF6 247 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ATF6BQ99941 703 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CIPCQ9C0C6 399 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 ANKRA2Q9H9E1 313 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 IMP3Q9NV31 184 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 SCN3BQ9NY72 215 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 CLEC4AQ9UMR7 237 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 POFUT2Q9Y2G5 429 aa4.29□□□□□ -1.72
DEPDC1-202ENST00000456315 A0A1W2PPK0 400 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TMEM202A6NGA9 273 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SCELO95171 688 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 MUC1P15941 1255 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 BTF3P20290 206 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 SHC1P29353 583 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 GSG1Q2KHT4 349 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TTLL9Q3SXZ7 439 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF704Q6ZNC4 412 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 DBX2Q6ZNG2 339 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TEX26Q8N6G2 289 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 OR51Q1Q8NH59 317 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 C1GALT1C1Q96EU7 318 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 FUZQ9BT04 418 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 QRSL1Q9H0R6 528 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 C11orf16Q9NQ32 467 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 TDP1Q9NUW8 608 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NKIRAS2Q9NYR9 191 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 LRFN2Q9ULH4 789 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NPTNQ9Y639 398 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 KCNE1BA0A087WTH5 132 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 FRS3O43559 492 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CCNDBP1O95273 360 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 IDSP22304 550 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 NFYBP25208 207 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 MAPKAPK2P49137 400 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 RPS14P62263 151 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 PCDH1Q08174 1060 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 EIF2B5Q13144 721 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 MAB21L1Q13394 359 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 IRF5Q13568 498 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 HYAL4Q2M3T9 481 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ZNF791Q3KP31 576 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 XKR4Q5GH76 650 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 CDCP2Q5VXM1 449 aa4.28□□□□□ -1.72
DEPDC1-202ENST00000456315 ATG9BQ674R7 924 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms