RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 CEP68Q76N32 757 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 STK32CQ86UX6 486 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CCDC116Q8IYX3 515 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CLEC4FQ8N1N0 589 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 C10orf111Q8N326 155 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ADAMTS15Q8TE58 950 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 APOBEC4Q8WW27 367 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 JPH3Q8WXH2 748 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 TAMM41Q96BW9 452 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 GIMAP5Q96F15 307 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 TMEM19Q96HH6 336 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 NRTNQ99748 197 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 TREX2Q9BQ50 279 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 NDC1Q9BTX1 674 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 MRPS26Q9BYN8 205 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM60AQ9NP50 221 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 MKKSQ9NPJ1 570 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 PRDM6Q9NQX0 595 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SOHLH2Q9NX45 425 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 NDUFAF4Q9P032 175 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 BLOC1S6Q9UL45 172 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 USP22Q9UPT9 525 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CCDC88CQ9P219 2028 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 B4GAT1O43505 415 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 FOXS1O43638 330 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 FOXD2O60548 495 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 PRAMEF2O60811 474 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 H6PDO95479 791 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 LGI1O95970 557 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 DBIP07108 87 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CDK4P11802 303 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 HOXB3P14651 431 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 PVRP15151 417 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 TTKP33981 857 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 IFNGR2P38484 337 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 DMWDQ09019 674 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 COX10Q12887 443 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 DUSP8Q13202 625 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 LARS2Q15031 903 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 NKG7Q16617 165 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 LRRC36Q1X8D7 754 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 HLA-BQ31612 363 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 COLEC12Q5KU26 742 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 RBM48Q5RL73 367 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 KRT80Q6KB66 452 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CD300LDQ6UXZ3 194 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ARHGAP22Q7Z5H3 698 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ZNF605Q86T29 641 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 FAM20CQ8IXL6 584 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 PEX5LQ8IYB4 626 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC43A2Q8N370 569 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ZCCHC10Q8TBK6 192 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ADAMTS16Q8TE57 1224 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 GIPC3Q8TF64 312 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 NCSTNQ92542 709 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 ANKRD9Q96BM1 317 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 OR7D2Q96RA2 312 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CCNL2Q96S94 520 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SLC29A1Q99808 456 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 HOXD1Q9GZZ0 328 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SEMA6AQ9H2E6 1030 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 RUBCNLQ9H714 662 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 PRTFDC1Q9NRG1 225 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 CUTCQ9NTM9 273 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 C14orf105Q9NVL8 296 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 UCKL1Q9NWZ5 548 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 SEC14L3Q9UDX4 400 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 MRTO4Q9UKD2 239 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 MYRFQ9Y2G1 1151 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 POFUT2Q9Y2G5 429 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 KLHL20Q9Y2M5 609 aa6.41□□□□□ -1.38
ECHDC1-210ENST00000454859 IGHV5-51A0A0C4DH38 117 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 A0A1W2PRQ8 180 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 C7orf72A4D263 438 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 SAC3D1A6NKF1 404 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 TRIM64CA6NLI5 447 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 OR6C76A6NM76 312 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 TMEM229AB2RXF0 380 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 E9PQ18 207 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 FAAHO00519 579 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 DLGAP1O14490 977 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 EI24O14681 340 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 HRO43593 1189 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 MPZL2O60487 215 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 STX11O75558 287 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 OR2B3O76000 313 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 NKX2-2O95096 273 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 B3GALT4O96024 378 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 ALPPP05187 535 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 EIF2S1P05198 315 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 BCHEP06276 602 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 CKMT2P17540 419 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 RPS4Y1P22090 263 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 RRM2P31350 389 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 LIMS1P48059 325 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 CRYBA2P53672 197 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 NUP107P57740 925 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 GABARAPL2P60520 117 aa6.4□□□□□ -1.38
ECHDC1-210ENST00000454859 FUT7Q11130 342 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms