RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 NDUFB11Q9NX14 153 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 KLHL21Q9UJP4 597 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 ARID1AO14497 2285 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 OR1F1O43749 312 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 PAHP00439 452 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 FGBP02675 491 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 TRAPPC2P0DI81 140 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 TRAPPC2BP0DI82 140 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 DDCP20711 480 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SP140Q13342 867 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 C22orf39Q6P5X5 142 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 PCSK9Q8NBP7 692 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 THAP7Q9BT49 309 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 RBCK1Q9BYM8 510 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 C1GALT1Q9NS00 363 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 TAC3Q9UHF0 121 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 RP1L1Q8IWN7 2480 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 DAPL1A0PJW8 107 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SOCS5O75159 536 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 MPC1LP0DKB6 136 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 C1GALT1C1LP0DN25 315 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 TSPAN5P62079 268 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 TMEM115Q12893 351 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 ILKQ13418 452 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SF3A2Q15428 464 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 PLK5Q496M5 336 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SYT14P1Q58G82 188 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 RDH10Q8IZV5 341 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 CLDN22Q8N7P3 220 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 GALNT6Q8NCL4 622 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 DOK4Q8TEW6 326 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SPRYD4Q8WW59 207 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 RFKQ969G6 155 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 RAD51AP1Q96B01 352 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 UPRTQ96BW1 309 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 FEZF1A0PJY2 475 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 GCM2O75603 506 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 GIFP27352 417 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 NTSP30990 170 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 CRYBA2P53672 197 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 METTL2BQ6P1Q9 378 aaKnown RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 VN1R5Q7Z5H4 357 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 MEIOBQ8N635 442 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 BBS10Q8TAM1 723 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SLC5A11Q8WWX8 675 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF582Q96NG8 517 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 ARHGAP39Q9C0H5 1083 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 NIPAL2Q9H841 368 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 ATP13A2Q9NQ11 1180 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 NANSQ9NR45 359 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 THSD1Q9NS62 852 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 CXXC1Q9P0U4 656 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 FTSJ1Q9UET6 329 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 RGS17Q9UGC6 210 aaPredicted RBP13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 FBXW2Q9UKT8 454 aa13.13□□□□□ -0.31
UBE2D3-210ENST00000453744 KCNE1BA0A087WTH5 132 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 POM121CA8CG34 1229 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HEPACAM2A8MVW5 462 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 J3QLW9 94 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HRO43593 1189 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 FZD6O60353 706 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 REM1O75628 298 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 GALTP07902 379 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PCSK2P16519 638 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF19P17023 458 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 IMPA1P29218 277 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 NCBP2P52298 156 aaKnown RBP eCLIP13.12□□□□□ -0.313e-11■■□□□ 12.6
UBE2D3-210ENST00000453744 SNTA1Q13424 505 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HSD11B1LQ7Z5J1 315 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 FTMTQ8N4E7 242 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ZNF480Q8WV37 535 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 UBE2E3Q969T4 207 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 DHRS9Q9BPW9 319 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 ABCG4Q9H172 646 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 TTYH1Q9H313 450 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 RC3H2Q9HBD1 1191 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 P2RX2Q9UBL9 471 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PRAMEF25A6NGN4 478 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 B8ZZF3 427 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 M0R233 179 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 LRG1P02750 347 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 RPLP2P05387 115 aaKnown RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 FURINP09958 794 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 BMP7P18075 431 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PKLRP30613 574 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PCDH1Q08174 1060 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 PGBD2Q6P3X8 592 aa13.12□□□□□ -0.31
UBE2D3-210ENST00000453744 CREB3L2Q70SY1 520 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms