RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 EMC8O43402 210 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 B3GALT2O43825 422 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 UGT2B17O75795 530 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 CHMP24386 653 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 ENTPD1P49961 510 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 TMBIM6P55061 237 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 HHEXQ03014 270 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 CHRNEQ04844 493 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 FAM111BQ6SJ93 734 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 SLC16A11Q8NCK7 471 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 APOBEC4Q8WW27 367 aaKnown RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 RSC1A1Q92681 617 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 ZFYVE21Q9BQ24 234 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 FNDC11Q9BVV2 318 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 LMAN1LQ9HAT1 526 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 USP36Q9P275 1121 aaKnown RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 MKLN1Q9UL63 735 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 GPC6Q9Y625 555 aaPredicted RBP11.08□□□□□ -0.64
VTA1-203ENST00000452973 HS3ST3A1Q9Y663 406 aa11.08□□□□□ -0.64
VTA1-203ENST00000452973 C2orf74A8MZ97 194 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 HCRTR1O43613 425 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 FCMRO60667 390 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 BCL10O95999 233 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 JUNDP17535 347 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 TNNI3P19429 210 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ITIH1P19827 911 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ELAVL4P26378 380 aaKnown RBP11.07□□□□□ -0.64
VTA1-203ENST00000452973 CNR2P34972 360 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 TUBA3CQ13748 450 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 FZD2Q14332 565 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 UBXN2BQ14CS0 331 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 SPCS2Q15005 226 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 SYT16Q17RD7 645 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 VRK2Q86Y07 508 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 TSTD1Q8NFU3 115 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 OR7G2Q8NG99 324 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 OR56A1Q8NGH5 318 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 SLC7A13Q8TCU3 470 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ADAMTS15Q8TE58 950 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 RAB2BQ8WUD1 216 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ZNF681Q96N22 645 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 DOK1Q99704 481 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 CCDC3Q9BQI4 270 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 RBCK1Q9BYM8 510 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ROGDIQ9GZN7 287 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 TIMMDC1Q9NPL8 285 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 LYARQ9NX58 379 aaKnown RBP11.07□□□□□ -0.64
VTA1-203ENST00000452973 ZSCAN32Q9NX65 697 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 SPTY2D1-AS1A0A0U1RR47 76 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 CTSBP07858 339 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 CBLP22681 906 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 AVPR1BP47901 424 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 LIMS1P48059 325 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 HMGA2P52926 109 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ZNF311Q5JNZ3 666 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ABI3BPQ7Z7G0 1075 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 LRRC25Q8N386 305 aaPredicted RBP11.07□□□□□ -0.64
VTA1-203ENST00000452973 OR4K14Q8NGD5 310 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 RASSF5Q8WWW0 418 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ZNF764Q96H86 408 aaPredicted RBP11.07□□□□□ -0.64
VTA1-203ENST00000452973 MIR1-1HGQ9H1L0 117 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 IL21RQ9HBE5 538 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ADAP2Q9NPF8 381 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 ZNF226Q9NYT6 803 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 SLC13A4Q9UKG4 626 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 SLC9A8Q9Y2E8 581 aa11.07□□□□□ -0.64
VTA1-203ENST00000452973 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
VTA1-203ENST00000452973 NTN1O95631 604 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 TLX1P31314 330 aaPredicted RBP11.06□□□□□ -0.64
VTA1-203ENST00000452973 ANXA11P50995 505 aaKnown RBP11.06□□□□□ -0.64
VTA1-203ENST00000452973 CXCR4P61073 352 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 TNFRSF17Q02223 184 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 SRSF5Q13243 272 aaKnown RBP11.06□□□□□ -0.64
VTA1-203ENST00000452973 TRMT12Q53H54 448 aaKnown RBP11.06□□□□□ -0.64
VTA1-203ENST00000452973 MLIPQ5VWP3 458 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 PTCHD4Q6ZW05 846 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 ALDH16A1Q8IZ83 802 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 CACTIN-AS1Q8N1I8 211 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 CAMKVQ8NCB2 501 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 RHOXF1Q8NHV9 184 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 RNF217Q8TC41 542 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 GPBAR1Q8TDU6 330 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 GAB3Q8WWW8 586 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 KLHL6Q8WZ60 621 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 ACOT13Q9NPJ3 140 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 MS4A12Q9NXJ0 267 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 CLDN24A6NM45 220 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 MBTPS2O43462 519 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 STSP08842 583 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 ALOX12P18054 663 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 RFX3P48380 749 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 CRISP1P54107 249 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 MAZP56270 477 aaKnown RBP11.06□□□□□ -0.64
VTA1-203ENST00000452973 VBP1P61758 197 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 SHC2P98077 582 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 AQP6Q13520 282 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 CCNJQ5T5M9 372 aa11.06□□□□□ -0.64
VTA1-203ENST00000452973 ATAD3BQ5T9A4 648 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms