RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZNF597Q96LX8 424 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ENKD1Q9H0I2 346 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PROK2Q9HC23 129 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ACKR4Q9NPB9 350 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 DCDC2Q9UHG0 476 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 CES1P1Q9UKY3 287 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 CNOT11Q9UKZ1 510 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 STK38LQ9Y2H1 464 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ZNF780BQ9Y6R6 833 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 MED12Q93074 2177 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 TEP1Q99973 2627 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 LRRC3CA6NJW4 275 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 SNX4O95219 450 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 GABRA1P14867 456 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 GDF1P27539 372 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 MASP1P48740 699 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PRKAA2P54646 552 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 MAP4K2Q12851 820 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 LCP2Q13094 533 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PRICKLE4Q2TBC4 344 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PRR22Q8IZ63 422 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 ZNF295-AS1Q8N0V1 137 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 MMP21Q8N119 569 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 RILPQ96NA2 401 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 SECISBP2Q96T21 854 aaKnown RBP11.84□□□□□ -0.51
CHD3-206ENST00000452447 TTYH2Q9BSA4 534 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 UCK2Q9BZX2 261 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 SPRR3Q9UBC9 169 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 UTS2RQ9UKP6 389 aa11.84□□□□□ -0.51
CHD3-206ENST00000452447 PDZD2O15018 2839 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 GNG14A0A1W2PPG7 69 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 NKX2-6A6NCS4 301 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 TRAPPC6AO75865 159 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 ENO1P06733 434 aaKnown RBP11.83□□□□□ -0.52
CHD3-206ENST00000452447 HOXD4P09016 255 aaPredicted RBP11.83□□□□□ -0.52
CHD3-206ENST00000452447 S1PR1P21453 382 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 GPX3P22352 226 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 ABCD3P28288 659 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 TRPC1P48995 793 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 PKNOX1P55347 436 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 ACSM2AQ08AH3 577 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 SPIN4Q56A73 249 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 ACSM2BQ68CK6 577 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 FAM180BQ6P0A1 224 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 FAM111BQ6SJ93 734 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 ADCY4Q8NFM4 1077 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 SPPL2AQ8TCT8 520 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 CCDC126Q96EE4 140 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 L3HYPDHQ96EM0 354 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 LURAP1Q96LR2 239 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 TXLNGYQ9BZA5 131 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 NXF5Q9H1B4 397 aaKnown RBP11.83□□□□□ -0.52
CHD3-206ENST00000452447 SLC6A15Q9H2J7 730 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 MAT2BQ9NZL9 334 aa11.83□□□□□ -0.52
CHD3-206ENST00000452447 OTOGQ6ZRI0 2925 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 C15orf38-AP3S2A0A0A6YYH1 394 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 FAM47E-STBD1D6RA91 191 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 PCDH7O60245 1069 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 CDH16O75309 829 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 TRIM3O75382 744 aaPredicted RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 GLI4P10075 376 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 DRD2P14416 443 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 CHN1P15882 459 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 NAGAP17050 411 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 ENDOUP21128 410 aaKnown RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 ELAVL4P26378 380 aaKnown RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 CASP3P42574 277 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 ZFP36L2P47974 494 aaKnown RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 HEPACAMQ14CZ8 416 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 EXOSC7Q15024 291 aaKnown RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 TOMM20Q15388 145 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 NNATQ16517 81 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 C1orf185Q5T7R7 199 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 FAM219BQ5XKK7 198 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 BICRALQ6AI39 1079 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 RTL6Q6ICC9 239 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 GSPT2Q8IYD1 628 aaKnown RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 CCNYL1Q8N7R7 359 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 NEIL3Q8TAT5 605 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 HSPBAP1Q96EW2 488 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 C14orf79Q96F83 325 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 CNRIP1Q96F85 164 aaPredicted RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 LCORQ96JN0 433 aaPredicted RBP11.82□□□□□ -0.52
CHD3-206ENST00000452447 ITPAQ9BY32 194 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 ANGPTL4Q9BY76 406 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 ACPTQ9BZG2 426 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 MID1IP1Q9NPA3 183 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 PRODH2Q9UF12 536 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 DTX4Q9Y2E6 619 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 DLGAP4Q9Y2H0 992 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 TIMM22Q9Y584 194 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 FAM215AQ9Y5M1 114 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 MPDZO75970 2070 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 AKAP6Q13023 2319 aa11.82□□□□□ -0.52
CHD3-206ENST00000452447 ANKHD1Q8IWZ3 2542 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms