RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ACAD11Q709F0 780 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 GBP7Q8N8V2 638 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 EIF1ADQ8N9N8 165 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 SIMC1Q8NDZ2 872 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 LILRB4Q8NHJ6 448 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 METTL6Q8TCB7 284 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 SPPL2AQ8TCT8 520 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 ASB5Q8WWX0 329 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 DIO2Q92813 273 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 KLHL29Q96CT2 875 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 CNRIP1Q96F85 164 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 ZNF597Q96LX8 424 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 SECISBP2Q96T21 854 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 NXF5Q9H1B4 397 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 ACKR4Q9NPB9 350 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 NPDC1Q9NQX5 325 aaPredicted RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 QPCTLQ9NXS2 382 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 HEY2Q9UBP5 337 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 TBK1Q9UHD2 729 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 MCM8Q9UJA3 840 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 STK38LQ9Y2H1 464 aa11.45□□□□□ -0.58
CPSF4-208ENST00000452047 INTS1Q8N201 2190 aaKnown RBP11.45□□□□□ -0.58
CPSF4-208ENST00000452047 A0A1W2PPM1 405 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ENO4A6NNW6 628 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 CAPN14A8MX76 684 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 FOXO6A8MYZ6 492 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 G3V2L1 256 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 UBFD1O14562 309 aaKnown RBP11.44□□□□□ -0.58
CPSF4-208ENST00000452047 TP53I11O14683 189 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 WDR1O75083 606 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ULK1O75385 1050 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ESRRBO95718 433 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 SHBGP04278 402 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ENO1P06733 434 aaKnown RBP11.44□□□□□ -0.58
CPSF4-208ENST00000452047 CSNK2A2P19784 350 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-208ENST00000452047 HMOX2P30519 316 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 PKNOX1P55347 436 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 NRG3P56975 720 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 HMGCS1Q01581 520 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 EXOSC7Q15024 291 aaKnown RBP11.44□□□□□ -0.58
CPSF4-208ENST00000452047 LTB4RQ15722 352 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 FNDC7Q5VTL7 733 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ZNF585AQ6P3V2 769 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 CCDC71Q8IV32 467 aaPredicted RBP11.44□□□□□ -0.58
CPSF4-208ENST00000452047 PRR22Q8IZ63 422 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ADCY4Q8NFM4 1077 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 NEIL3Q8TAT5 605 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 SARAFQ96BY9 339 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 APIPQ96GX9 242 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 RILPQ96NA2 401 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 KCNA7Q96RP8 456 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 TTYH2Q9BSA4 534 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 FAIM2Q9BWQ8 316 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ITPAQ9BY32 194 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ANGPTL4Q9BY76 406 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 BRINP2Q9C0B6 783 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 SLC6A15Q9H2J7 730 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 UBQLN3Q9H347 655 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 LDAHQ9H6V9 325 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 DCDC2Q9UHG0 476 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 PSME2Q9UL46 239 aa11.44□□□□□ -0.58
CPSF4-208ENST00000452047 ANKRD17O75179 2603 aaKnown RBP11.43□□□□□ -0.58
CPSF4-208ENST00000452047 SERTM1A2A2V5 107 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 NKX2-6A6NCS4 301 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 PCDH7O60245 1069 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 GLRA3O75311 464 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 TOXO94900 526 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 PROCP04070 461 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 IL3P08700 152 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 GLI4P10075 376 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 GDF1P27539 372 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 TIA1P31483 386 aaKnown RBP eCLIP11.43□□□□□ -0.58
CPSF4-208ENST00000452047 CASP3P42574 277 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 ALDH9A1P49189 494 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 EMDP50402 254 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 FOXA1P55317 472 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 NNATQ16517 81 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 TRMT12Q53H54 448 aaKnown RBP11.43□□□□□ -0.58
CPSF4-208ENST00000452047 SPIN4Q56A73 249 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 WLSQ5T9L3 541 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 TMEM81Q6P7N7 255 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 GALNT18Q6P9A2 607 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 ZYG11AQ6WRX3 759 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 B3GNT6Q6ZMB0 384 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 ZNF675Q8TD23 568 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-208ENST00000452047 C14orf79Q96F83 325 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 LURAP1Q96LR2 239 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 JSRP1Q96MG2 331 aaPredicted RBP11.43□□□□□ -0.58
CPSF4-208ENST00000452047 UCK2Q9BZX2 261 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 SIRT5Q9NXA8 310 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 B4GALT7Q9UBV7 327 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 UTS2RQ9UKP6 389 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 ACAD8Q9UKU7 415 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 CFL2Q9Y281 166 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 DLGAP4Q9Y2H0 992 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 PLLPQ9Y342 182 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 TIMM22Q9Y584 194 aa11.43□□□□□ -0.58
CPSF4-208ENST00000452047 PCDHGB3Q9Y5G1 929 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms