RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CLDN24A6NM45 220 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PDZK1P1A8MUH7 402 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 NPIPB9F8W1W9 429 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SLC1A7O00341 560 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 DEAF1O75398 565 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 LGI1O95970 557 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ACADMP11310 421 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ETS2P15036 469 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PPIBP23284 216 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 CXCR2P25025 360 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PDX1P52945 283 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CHRNB3Q05901 458 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 HEPACAMQ14CZ8 416 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MICAQ29983 383 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 TNFAIP8L2Q6P589 184 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 C19orf48Q6RUI8 117 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ZNF574Q6ZN55 896 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 VASH1Q7L8A9 365 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 HMGN2P46Q86SG4 172 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 GJD3Q8N144 294 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 FAR1Q8WVX9 515 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 TIMP4Q99727 224 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CLK4Q9HAZ1 481 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 ATAD3AQ9NVI7 634 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MAT2BQ9NZL9 334 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 IFT80Q9P2H3 777 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 FAF1Q9UNN5 650 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 LIPT1Q9Y234 373 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RNF6Q9Y252 685 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 IGKV3D-11A0A0A0MRZ8 115 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ASNA1O43681 348 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 HTR2AP28223 471 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 NDUFS1P28331 727 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CRATP43155 626 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RPL5P46777 297 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 CRISP3P54108 245 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 LSAMPQ13449 338 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RAB39AQ14964 217 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MAD2L1BPQ15013 274 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 TEAD4Q15561 434 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MFSD12Q6NUT3 480 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 DHRS4L2Q6PKH6 230 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 NPSR1Q6W5P4 371 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SLC16A11Q8NCK7 471 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 TSPAN14Q8NG11 270 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ZDHHC1Q8WTX9 485 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MUL1Q969V5 352 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MESP1Q9BRJ9 268 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PCED1AQ9H1Q7 454 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 DUSP15Q9H1R2 295 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 SEMA6CQ9H3T2 930 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SRMSQ9H3Y6 488 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SLC25A19Q9HC21 320 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CAPN10Q9HC96 672 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CDC14AQ9UNH5 594 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SNX7Q9UNH6 387 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 NTNG1Q9Y2I2 539 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PMF1-BGLAPU3KQ54 211 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 KIAA1549Q9HCM3 1950 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 LILRA5A6NI73 299 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ZAR1LA6NP61 321 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ATE1O95260 518 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 TNFP01375 233 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CMPK1P30085 196 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 HOXA6P31267 233 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RPL3P39023 403 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 CCT3P49368 545 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 TSTA3Q13630 321 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 FAM53BQ14153 422 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CTF1Q16619 201 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 C6orf141Q5SZD1 244 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 REEP3Q6NUK4 255 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RD3Q7Z3Z2 195 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CCDC116Q8IYX3 515 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SIX5Q8N196 739 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PARP8Q8N3A8 854 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 OR6T1Q8NGN1 323 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CDC26Q8NHZ8 85 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ZNF675Q8TD23 568 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PPWD1Q96BP3 646 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 ZNF354BQ96LW1 612 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 UCN2Q96RP3 112 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SERINC2Q96SA4 455 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 FEVQ99581 238 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 RNF215Q9Y6U7 377 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 EML6Q6ZMW3 1958 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 MN1Q10571 1320 aaPredicted RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 OR2W5A6NFC9 320 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 FAM170BA6NMN3 283 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 TLR4O00206 839 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 SLITRK5O94991 958 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 CHMP24386 653 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 FEN1P39748 380 aaKnown RBP6.16□□□□□ -1.42
USP46-202ENST00000451218 FNTBP49356 437 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 BTN3A2P78410 334 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 PSG6Q00889 435 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 DUSP5Q16690 384 aa6.16□□□□□ -1.42
USP46-202ENST00000451218 FNDC7Q5VTL7 733 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms