RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 LGI4Q8N135 537 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 APCDD1LQ8NCL9 501 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 B3GNT7Q8NFL0 401 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 CDC26Q8NHZ8 85 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 C16orf78Q8WTQ4 265 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 NCLNQ969V3 563 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 SCMH1Q96GD3 660 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 TSPAN10Q9H1Z9 355 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 LRMDAQ9H2I8 198 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 LIN28AQ9H9Z2 209 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 MYNNQ9NPC7 610 aa15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 ZNF223Q9UK11 482 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-204ENST00000450303 MAST4O15021 2626 aa15.83■□□□□ 0.13
PRPF40A-204ENST00000450303 CTNSO60931 367 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 LDB3O75112 727 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 STSP08842 583 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 ALDOCP09972 364 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 G6PDP11413 515 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 DRD2P14416 443 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 SDC1P18827 310 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 ELF3P78545 371 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 ID2Q02363 134 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 C2orf80Q0P641 193 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 SQLEQ14534 574 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 PDCD4Q53EL6 469 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 FAM91A1Q658Y4 838 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 TMEM198Q66K66 360 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 MRM1Q6IN84 353 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 C16orf47Q6ZP98 133 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 MAMDC2Q7Z304 686 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 ZNF227Q86WZ6 799 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 MIER2Q8N344 545 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 TM4SF18Q96CE8 201 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 NSL1Q96IY1 281 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 TSSK3Q96PN8 268 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 ZBTB18Q99592 522 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 PRPF18Q99633 342 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 ALOXE3Q9BYJ1 711 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 DPY30Q9C005 99 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 DLGAP4Q9Y2H0 992 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 PCDHGB6Q9Y5F9 930 aa15.83■□□□□ 0.12
PRPF40A-204ENST00000450303 TRGV8A0A0C4DH27 118 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 TMPRSS11DO60235 418 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 PRKNO60260 465 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ZG16O60844 167 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 TNNI3P19429 210 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 PRPS1L1P21108 318 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ADSLP30566 484 aaPredicted RBP15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 HPCAL1P37235 193 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 CYB561P49447 251 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 GPR143P51810 404 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 CLNS1AP54105 237 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 DIO3P55073 304 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 CLDN8P56748 225 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ALDH6A1Q02252 535 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 STX4Q12846 297 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 RIPK1Q13546 671 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ASRGL1Q7L266 308 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 R3HCC1LQ7Z5L2 792 aaKnown RBP15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 OR4N5Q8IXE1 308 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ARHGAP24Q8N264 748 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 HORMAD2Q8N7B1 307 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 TMEM178AQ8NBL3 297 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 VMP1Q96GC9 406 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 BRINP2Q9C0B6 783 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ADAP2Q9NPF8 381 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 TMEM45AQ9NWC5 275 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ZIM2Q9NZV7 527 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 SH3BGRL2Q9UJC5 107 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 ASB4Q9Y574 426 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 GPR45Q9Y5Y3 372 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 DOPEY1Q5JWR5 2465 aa15.82■□□□□ 0.12
PRPF40A-204ENST00000450303 C1orf226A1L170 272 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 NPIPA5E9PKD4 350 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 FCHO1O14526 889 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 ZNHIT1O43257 154 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 PROM1O43490 865 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 SLC25A12O75746 678 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 CALB2P22676 271 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 MRPL19P49406 292 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 HLCSP50747 726 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 PER3P56645 1201 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 TNFRSF17Q02223 184 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 CPSF7Q8N684 471 aaKnown RBP15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 ZNF321PQ8N8H1 164 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 GLB1L3Q8NCI6 653 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 C7orf57Q8NEG2 295 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 MTERF3Q96E29 417 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 MARK4Q96L34 752 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 MIEF1Q9NQG6 463 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 SDR39U1Q9NRG7 319 aaPredicted RBP15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 BAIAP2L1Q9UHR4 511 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 PSME2Q9UL46 239 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 NPIPA1Q9UND3 350 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 CLCA3PQ9Y6N3 262 aa15.81■□□□□ 0.12
PRPF40A-204ENST00000450303 A0A1B0GUH1 482 aa15.8■□□□□ 0.12
PRPF40A-204ENST00000450303 SLC22A2O15244 555 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms