RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GABARAPL3Q9BY60 117 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TMPRSS13Q9BYE2 586 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CNTNAP3Q9BZ76 1288 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 BHLHE41Q9C0J9 482 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 XYLT2Q9H1B5 865 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLCO5A1Q9H2Y9 848 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OSGEPL1Q9H4B0 414 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC6A20Q9NP91 592 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SCUBE2Q9NQ36 999 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FLRT1Q9NZU1 646 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CFAP97Q9P2B7 532 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 METTL1Q9UBP6 276 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MIOXQ9UGB7 285 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PCDHB11Q9Y5F2 797 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 A0A087WZY1 265 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ARRDC5A6NEK1 342 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TVP23AA6NH52 213 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 A8MU76 341 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 USP17L10C9JJH3 530 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 F8VP50 259 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SCAF4O95104 1147 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 ZBTB7AO95365 584 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PTBP3O95758 552 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 LGI1O95970 557 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GSRP00390 522 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 GH2P01242 217 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LTFP02788 710 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TCRBP04435 133 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 H1F0P07305 194 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 RHCEP18577 417 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NUMBP49757 651 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ART1P52961 327 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 WNT7BP56706 349 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DAOAP59103 153 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ARF3P61204 181 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 RPS14P62263 151 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 ARF1P84077 181 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SCARB2Q14108 478 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 VEZF1Q14119 521 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ACOT6Q3I5F7 207 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SLC39A12Q504Y0 691 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR2B11Q5JQS5 317 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF678Q5SXM1 525 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OTUD1Q5VV17 481 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MLIPQ5VWP3 458 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 REEP3Q6NUK4 255 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ESRP1Q6NXG1 681 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 B3GLCTQ6Y288 498 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 WDR88Q6ZMY6 472 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LDHDQ86WU2 507 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NKAIN4Q8IVV8 208 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FOXRED2Q8IWF2 684 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 LILRB2Q8N423 598 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CPA6Q8N4T0 437 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FBXO15Q8NCQ5 510 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 FLAD1Q8NFF5 587 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TSTD1Q8NFU3 115 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR7D4Q8NG98 312 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 OR13D1Q8NGV5 346 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TRMT10AQ8TBZ6 339 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SEMA4DQ92854 862 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 FBXO32Q969P5 355 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 MOAP1Q96BY2 351 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ACSF2Q96CM8 615 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 FOXRED1Q96CU9 486 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF382Q96SR6 550 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 ZNF649Q9BS31 505 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DOHHQ9BU89 302 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 SNRNP25Q9BV90 132 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 SEMA4CQ9C0C4 833 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DERL2Q9GZP9 239 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 TDRD3Q9H7E2 651 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 MED17Q9NVC6 651 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 DMAC2Q9NW81 257 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PIH1D1Q9NWS0 290 aaKnown RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 ASB6Q9NWX5 421 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 NDUFB11Q9NX14 153 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 KIAA1522Q9P206 1035 aaPredicted RBP2.11□□□□□ -2.07
USP53-202ENST00000450251 CRLS1Q9UJA2 301 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 CAMK2AQ9UQM7 478 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 BOLA1Q9Y3E2 137 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 PCDHA2Q9Y5H9 948 aa2.11□□□□□ -2.07
USP53-202ENST00000450251 C5orf52A6NGY3 159 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NCF1BA6NI72 391 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 F5H423 210 aaPredicted RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 NME4O00746 187 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 LCE2BO14633 110 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 YY2O15391 372 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 NDUFA2O43678 99 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 PI15O43692 258 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 CLDN9O95484 217 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 F2P00734 622 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 GCGP01275 180 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 HIST1H2ABP04908 130 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 APEHP13798 732 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 BPIP17213 487 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ELK1P19419 428 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ANXA7P20073 488 aaKnown RBP2.1□□□□□ -2.07
USP53-202ENST00000450251 COL9A1P20849 921 aa2.1□□□□□ -2.07
USP53-202ENST00000450251 ACVR2AP27037 513 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms