RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DSG2Q14126 1118 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 CBX2Q14781 532 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 PODNL1Q6PEZ8 512 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 UNC5DQ6UXZ4 953 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 TAS1R1Q7RTX1 841 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 PLCZ1Q86YW0 608 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 TEX26Q8N6G2 289 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 SLC22A12Q96S37 553 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 OR51J1Q9H342 316 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 RPS6KB2Q9UBS0 482 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 AK6Q9Y3D8 172 aaKnown RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 TAF1LQ8IZX4 1826 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 GRXCR2A6NFK2 248 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM202A6NGA9 273 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 SPDEFO95238 335 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 HK1P19367 917 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 ADH7P40394 386 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 ETV5P41161 510 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 OMPP47874 163 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 ETV1P50549 477 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 CTSCP53634 463 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM115Q12893 351 aaPredicted RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM145Q8NBT3 493 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 C16orf78Q8WTQ4 265 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 APH1BQ8WW43 257 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 OPALINQ96PE5 141 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 SLC12A9Q9BXP2 914 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 DDX31Q9H8H2 851 aaKnown RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 P2RX2Q9UBL9 471 aa11.77□□□□□ -0.53
UBE3B-204ENST00000449510 KIAA0100Q14667 2235 aaKnown RBP11.77□□□□□ -0.53
UBE3B-204ENST00000449510 SH3D21A4FU49 640 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF670-ZNF695F2Z2N8 137 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ERI3O43414 337 aaKnown RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 DUSP11O75319 330 aaKnown RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 POP7O75817 140 aaKnown RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ETHE1O95571 254 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 SCG5P05408 212 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF250P15622 560 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 MAGEA2P43356 314 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 KIAA1024LP59773 190 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 FNDC3BQ53EP0 1204 aaKnown RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 FAM27D1Q5T7N8 215 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 NDUFAF5Q5TEU4 345 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 BRAT1Q6PJG6 821 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 SLC36A4Q6YBV0 504 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 PRSS45Q7RTY3 260 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 PCSK9Q8NBP7 692 aaKnown RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 OR8K5Q8NH50 307 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 OR4C6Q8NH72 309 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 WBP2Q969T9 261 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 KRCC1Q9NPI7 259 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 STOX2Q9P2F5 926 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 FKBP7Q9Y680 259 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 MEIS3P1A6NDR6 274 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 SHC1P29353 583 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 GZMKP49863 264 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 GMFBP60983 142 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 LMAN2Q12907 356 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ARSKQ6UWY0 536 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 PARGQ86W56 976 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 HOMEZQ8IX15 550 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 HORMAD2Q8N7B1 307 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 TESCQ96BS2 214 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 RIPOR3Q96MK2 946 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 C3orf14Q9HBI5 128 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 BTNL2Q9UIR0 455 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 FAM171A2A8MVW0 826 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 IFNA16P05015 189 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 PCGF2P35227 344 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 CLDN12P56749 244 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 SLC9A5Q14940 896 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 PRAMEF13Q5VWM6 474 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 FAM180AQ6UWF9 173 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 OR4N5Q8IXE1 308 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 NRMQ8IXM6 262 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 WFDC5Q8TCV5 224 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ISG20Q96AZ6 181 aaKnown RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 RANBP3Q9H6Z4 567 aaPredicted RBP11.76□□□□□ -0.53
UBE3B-204ENST00000449510 HHATLQ9HCP6 504 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ACER3Q9NUN7 267 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
UBE3B-204ENST00000449510 ADAP00813 363 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 HPGDP15428 266 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 IDSP22304 550 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 GRB14Q14449 540 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 IRF3Q14653 427 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 STK11Q15831 433 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 TOR2AQ5JU69 321 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 LIPJQ5W064 366 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 IKBIPQ70UQ0 350 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 CCDC190Q86UF4 302 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 TBC1D19Q8N5T2 526 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 PROKR2Q8NFJ6 384 aa11.75□□□□□ -0.53
UBE3B-204ENST00000449510 TRMT10AQ8TBZ6 339 aaKnown RBP11.75□□□□□ -0.53
UBE3B-204ENST00000449510 GCDHQ92947 438 aaPredicted RBP11.75□□□□□ -0.53
UBE3B-204ENST00000449510 MCHR1Q99705 422 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms